Gene : Sobic.004G032200 S. bicolor v3.1.1
Defline:  (1 of 2) 2.7.7.3 - Pantetheine-phosphate adenylyltransferase / PPAT Genomic Order:  341
Name:  ? Sobic.004G032200 Secondary Identifier:  ? PAC:37928970
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor COA-PWY Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G032200 0.5kb upstream 0.5kb upstream 3881 true Chr04: 2596379-2600259 Sorghum bicolor
Sobic.004G032200 0.5kb upstream 0.5kb upstream 500 false Chr04: 2596379-2596878 Sorghum bicolor
Sobic.004G032200 0.5kb downstream 0.5kb downstream 3881 true Chr04: 2596879-2600759 Sorghum bicolor
Sobic.004G032200 0.5kb downstream 0.5kb downstream 500 false Chr04: 2600260-2600759 Sorghum bicolor
Sobic.004G032200 1.0kb upstream 1.0kb upstream 4381 true Chr04: 2595879-2600259 Sorghum bicolor
Sobic.004G032200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2595879-2596878 Sorghum bicolor
Sobic.004G032200 1.0kb downstream 1.0kb downstream 4381 true Chr04: 2596879-2601259 Sorghum bicolor
Sobic.004G032200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2600260-2601259 Sorghum bicolor
Sobic.004G032200 2.0kb upstream 2.0kb upstream 5381 true Chr04: 2594879-2600259 Sorghum bicolor
Sobic.004G032200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2594879-2596878 Sorghum bicolor
Sobic.004G032200 2.0kb downstream 2.0kb downstream 5381 true Chr04: 2596879-2602259 Sorghum bicolor
Sobic.004G032200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2600260-2602259 Sorghum bicolor
Sobic.004G032200 5.0kb upstream 5.0kb upstream 8381 true Chr04: 2591879-2600259 Sorghum bicolor
Sobic.004G032200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2591879-2596878 Sorghum bicolor
Sobic.004G032200 5.0kb downstream 5.0kb downstream 8381 true Chr04: 2596879-2605259 Sorghum bicolor
Sobic.004G032200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2600260-2605259 Sorghum bicolor
Sobic.004G032200 10.0kb upstream 10.0kb upstream 13381 true Chr04: 2586879-2600259 Sorghum bicolor
Sobic.004G032200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2586879-2596878 Sorghum bicolor
Sobic.004G032200 10.0kb downstream 10.0kb downstream 13381 true Chr04: 2596879-2610259 Sorghum bicolor
Sobic.004G032200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2600260-2610259 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178137 5267 Panicoideae View MSA
124580245 5269 Grass View MSA
122050871 5273 Angiosperm View MSA
121345308 5274 Embryophyte View MSA
123425957 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.76       High
cufflinks 2.248        
cufflinks 1.68        
cufflinks 0.492        
cufflinks 0.253       Low
cufflinks 0.605        
cufflinks 3.562        
cufflinks 4.3        
cufflinks 0.113       Low
cufflinks 0.206       Low
cufflinks 2.147        
cufflinks 2.622        
cufflinks 0.881        
cufflinks 2.85        
cufflinks 2.281        
cufflinks 1.444        
cufflinks 4.903       High
cufflinks 4.533       High
cufflinks 0.701        
cufflinks 3.339        
cufflinks 0.008     Low Low
cufflinks 1.931        
cufflinks 2.964        
cufflinks 2.886        
cufflinks 0.984        
cufflinks 1.076        
cufflinks 1.883        
cufflinks 2.473        
cufflinks 6.108       High
cufflinks 0.519        

0 Strain