Gene : Sobic.004G056000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11945:SF147 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL16-RELATED Genomic Order:  582
Name:  ? Sobic.004G056000 Secondary Identifier:  ? PAC:37933218
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G056000 0.5kb upstream 0.5kb upstream 3778 true Chr04: 4506870-4510647 Sorghum bicolor
Sobic.004G056000 0.5kb upstream 0.5kb upstream 500 false Chr04: 4510148-4510647 Sorghum bicolor
Sobic.004G056000 0.5kb downstream 0.5kb downstream 3778 true Chr04: 4506370-4510147 Sorghum bicolor
Sobic.004G056000 0.5kb downstream 0.5kb downstream 500 false Chr04: 4506370-4506869 Sorghum bicolor
Sobic.004G056000 1.0kb upstream 1.0kb upstream 4278 true Chr04: 4506870-4511147 Sorghum bicolor
Sobic.004G056000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4510148-4511147 Sorghum bicolor
Sobic.004G056000 1.0kb downstream 1.0kb downstream 4278 true Chr04: 4505870-4510147 Sorghum bicolor
Sobic.004G056000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4505870-4506869 Sorghum bicolor
Sobic.004G056000 2.0kb upstream 2.0kb upstream 5278 true Chr04: 4506870-4512147 Sorghum bicolor
Sobic.004G056000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4510148-4512147 Sorghum bicolor
Sobic.004G056000 2.0kb downstream 2.0kb downstream 5278 true Chr04: 4504870-4510147 Sorghum bicolor
Sobic.004G056000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4504870-4506869 Sorghum bicolor
Sobic.004G056000 5.0kb upstream 5.0kb upstream 8278 true Chr04: 4506870-4515147 Sorghum bicolor
Sobic.004G056000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4510148-4515147 Sorghum bicolor
Sobic.004G056000 5.0kb downstream 5.0kb downstream 8278 true Chr04: 4501870-4510147 Sorghum bicolor
Sobic.004G056000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4501870-4506869 Sorghum bicolor
Sobic.004G056000 10.0kb upstream 10.0kb upstream 13278 true Chr04: 4506870-4520147 Sorghum bicolor
Sobic.004G056000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4510148-4520147 Sorghum bicolor
Sobic.004G056000 10.0kb downstream 10.0kb downstream 13278 true Chr04: 4496870-4510147 Sorghum bicolor
Sobic.004G056000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4496870-4506869 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175549 5267 Panicoideae View MSA
124589480 5269 Grass View MSA
122046677 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.047     Low  
cufflinks 0.005     Low Low
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 2.685       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.106     Low  
cufflinks 0.029     Low  
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.011     Low  
cufflinks 0.076        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 13.039     High High

0 Strain