Gene : Sobic.004G088501 S. bicolor v3.1.1
Defline:  (1 of 3) PTHR19876//PTHR19876:SF6 - COATOMER // COATOMER SUBUNIT BETA'-1 Genomic Order:  921
Name:  ? Sobic.004G088501 Secondary Identifier:  ? PAC:37929910
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G088501 0.5kb upstream 0.5kb upstream 15722 true Chr04: 7497924-7513645 Sorghum bicolor
Sobic.004G088501 0.5kb upstream 0.5kb upstream 500 false Chr04: 7513146-7513645 Sorghum bicolor
Sobic.004G088501 0.5kb downstream 0.5kb downstream 15722 true Chr04: 7497424-7513145 Sorghum bicolor
Sobic.004G088501 0.5kb downstream 0.5kb downstream 500 false Chr04: 7497424-7497923 Sorghum bicolor
Sobic.004G088501 1.0kb upstream 1.0kb upstream 16222 true Chr04: 7497924-7514145 Sorghum bicolor
Sobic.004G088501 1.0kb upstream 1.0kb upstream 1000 false Chr04: 7513146-7514145 Sorghum bicolor
Sobic.004G088501 1.0kb downstream 1.0kb downstream 16222 true Chr04: 7496924-7513145 Sorghum bicolor
Sobic.004G088501 1.0kb downstream 1.0kb downstream 1000 false Chr04: 7496924-7497923 Sorghum bicolor
Sobic.004G088501 2.0kb upstream 2.0kb upstream 17222 true Chr04: 7497924-7515145 Sorghum bicolor
Sobic.004G088501 2.0kb upstream 2.0kb upstream 2000 false Chr04: 7513146-7515145 Sorghum bicolor
Sobic.004G088501 2.0kb downstream 2.0kb downstream 17222 true Chr04: 7495924-7513145 Sorghum bicolor
Sobic.004G088501 2.0kb downstream 2.0kb downstream 2000 false Chr04: 7495924-7497923 Sorghum bicolor
Sobic.004G088501 5.0kb upstream 5.0kb upstream 20222 true Chr04: 7497924-7518145 Sorghum bicolor
Sobic.004G088501 5.0kb upstream 5.0kb upstream 5000 false Chr04: 7513146-7518145 Sorghum bicolor
Sobic.004G088501 5.0kb downstream 5.0kb downstream 20222 true Chr04: 7492924-7513145 Sorghum bicolor
Sobic.004G088501 5.0kb downstream 5.0kb downstream 5000 false Chr04: 7492924-7497923 Sorghum bicolor
Sobic.004G088501 10.0kb upstream 10.0kb upstream 25222 true Chr04: 7497924-7523145 Sorghum bicolor
Sobic.004G088501 10.0kb upstream 10.0kb upstream 10000 false Chr04: 7513146-7523145 Sorghum bicolor
Sobic.004G088501 10.0kb downstream 10.0kb downstream 25222 true Chr04: 7487924-7513145 Sorghum bicolor
Sobic.004G088501 10.0kb downstream 10.0kb downstream 10000 false Chr04: 7487924-7497923 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196447 5267 Panicoideae View MSA
124569399 5269 Grass View MSA
122046089 5273 Angiosperm View MSA
121350905 5274 Embryophyte View MSA
123424044 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.477        
cufflinks 0.834       Low
cufflinks 2.321        
cufflinks 3.225        
cufflinks 5.197        
cufflinks 2.832        
cufflinks 3.506        
cufflinks 1.622       Low
cufflinks 4.535        
cufflinks 4.704        
cufflinks 4.311        
cufflinks 4.742        
cufflinks 4.753        
cufflinks 4.432        
cufflinks 4.026        
cufflinks 1.844       Low
cufflinks 3.482        
cufflinks 3.697        
cufflinks 1.941       Low
cufflinks 3.728        
cufflinks 4.516        
cufflinks 5.178        
cufflinks 5.415        
cufflinks 5.403        
cufflinks 1.736       Low
cufflinks 0.928       Low
cufflinks 4.187        
cufflinks 2.172        
cufflinks 3.991        
cufflinks 4.338        

0 Strain