Gene : Sobic.004G088450 S. bicolor v3.1.1
Defline:  (1 of 3) PTHR19876:SF6 - COATOMER SUBUNIT BETA'-1 Genomic Order:  920
Name:  ? Sobic.004G088450 Secondary Identifier:  ? PAC:37931950
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G088450 0.5kb upstream 0.5kb upstream 11125 true Chr04: 7480867-7491991 Sorghum bicolor
Sobic.004G088450 0.5kb upstream 0.5kb upstream 500 false Chr04: 7491492-7491991 Sorghum bicolor
Sobic.004G088450 0.5kb downstream 0.5kb downstream 11125 true Chr04: 7480367-7491491 Sorghum bicolor
Sobic.004G088450 0.5kb downstream 0.5kb downstream 500 false Chr04: 7480367-7480866 Sorghum bicolor
Sobic.004G088450 1.0kb upstream 1.0kb upstream 11625 true Chr04: 7480867-7492491 Sorghum bicolor
Sobic.004G088450 1.0kb upstream 1.0kb upstream 1000 false Chr04: 7491492-7492491 Sorghum bicolor
Sobic.004G088450 1.0kb downstream 1.0kb downstream 11625 true Chr04: 7479867-7491491 Sorghum bicolor
Sobic.004G088450 1.0kb downstream 1.0kb downstream 1000 false Chr04: 7479867-7480866 Sorghum bicolor
Sobic.004G088450 2.0kb upstream 2.0kb upstream 12625 true Chr04: 7480867-7493491 Sorghum bicolor
Sobic.004G088450 2.0kb upstream 2.0kb upstream 2000 false Chr04: 7491492-7493491 Sorghum bicolor
Sobic.004G088450 2.0kb downstream 2.0kb downstream 12625 true Chr04: 7478867-7491491 Sorghum bicolor
Sobic.004G088450 2.0kb downstream 2.0kb downstream 2000 false Chr04: 7478867-7480866 Sorghum bicolor
Sobic.004G088450 5.0kb upstream 5.0kb upstream 15625 true Chr04: 7480867-7496491 Sorghum bicolor
Sobic.004G088450 5.0kb upstream 5.0kb upstream 5000 false Chr04: 7491492-7496491 Sorghum bicolor
Sobic.004G088450 5.0kb downstream 5.0kb downstream 15625 true Chr04: 7475867-7491491 Sorghum bicolor
Sobic.004G088450 5.0kb downstream 5.0kb downstream 5000 false Chr04: 7475867-7480866 Sorghum bicolor
Sobic.004G088450 10.0kb upstream 10.0kb upstream 20625 true Chr04: 7480867-7501491 Sorghum bicolor
Sobic.004G088450 10.0kb upstream 10.0kb upstream 10000 false Chr04: 7491492-7501491 Sorghum bicolor
Sobic.004G088450 10.0kb downstream 10.0kb downstream 20625 true Chr04: 7470867-7491491 Sorghum bicolor
Sobic.004G088450 10.0kb downstream 10.0kb downstream 10000 false Chr04: 7470867-7480866 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196447 5267 Panicoideae View MSA
124569399 5269 Grass View MSA
122046089 5273 Angiosperm View MSA
121350905 5274 Embryophyte View MSA
123424044 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.256        
cufflinks 1.785       Low
cufflinks 4.954        
cufflinks 6.867        
cufflinks 13.246     High  
cufflinks 7.258        
cufflinks 7.887        
cufflinks 2.85       Low
cufflinks 11.186        
cufflinks 10.798        
cufflinks 11.885     High  
cufflinks 11.738     High  
cufflinks 10.892        
cufflinks 12.951     High  
cufflinks 9.602        
cufflinks 3.649       Low
cufflinks 7.833        
cufflinks 8.449        
cufflinks 3.893       Low
cufflinks 8.667        
cufflinks 11.493        
cufflinks 15.767     High High
cufflinks 14.816     High  
cufflinks 15.042     High  
cufflinks 3.559       Low
cufflinks 1.817       Low
cufflinks 9.728        
cufflinks 6.492        
cufflinks 8.094        
cufflinks 10.587        

0 Strain