Gene : Sobic.004G084200 S. bicolor v3.1.1
Defline:  (1 of 1) PF00153//PF13499//PF13833 - Mitochondrial carrier protein (Mito_carr) // EF-hand domain pair (EF-hand_7) // EF-hand domain pair (EF-hand_8) Genomic Order:  873
Name:  ? Sobic.004G084200 Secondary Identifier:  ? PAC:37932301
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G084200 0.5kb upstream 0.5kb upstream 7322 true Chr04: 6986419-6993740 Sorghum bicolor
Sobic.004G084200 0.5kb upstream 0.5kb upstream 500 false Chr04: 6993241-6993740 Sorghum bicolor
Sobic.004G084200 0.5kb downstream 0.5kb downstream 7322 true Chr04: 6985919-6993240 Sorghum bicolor
Sobic.004G084200 0.5kb downstream 0.5kb downstream 500 false Chr04: 6985919-6986418 Sorghum bicolor
Sobic.004G084200 1.0kb upstream 1.0kb upstream 7822 true Chr04: 6986419-6994240 Sorghum bicolor
Sobic.004G084200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6993241-6994240 Sorghum bicolor
Sobic.004G084200 1.0kb downstream 1.0kb downstream 7822 true Chr04: 6985419-6993240 Sorghum bicolor
Sobic.004G084200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6985419-6986418 Sorghum bicolor
Sobic.004G084200 2.0kb upstream 2.0kb upstream 8822 true Chr04: 6986419-6995240 Sorghum bicolor
Sobic.004G084200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6993241-6995240 Sorghum bicolor
Sobic.004G084200 2.0kb downstream 2.0kb downstream 8822 true Chr04: 6984419-6993240 Sorghum bicolor
Sobic.004G084200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6984419-6986418 Sorghum bicolor
Sobic.004G084200 5.0kb upstream 5.0kb upstream 11822 true Chr04: 6986419-6998240 Sorghum bicolor
Sobic.004G084200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6993241-6998240 Sorghum bicolor
Sobic.004G084200 5.0kb downstream 5.0kb downstream 11822 true Chr04: 6981419-6993240 Sorghum bicolor
Sobic.004G084200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6981419-6986418 Sorghum bicolor
Sobic.004G084200 10.0kb upstream 10.0kb upstream 16822 true Chr04: 6986419-7003240 Sorghum bicolor
Sobic.004G084200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6993241-7003240 Sorghum bicolor
Sobic.004G084200 10.0kb downstream 10.0kb downstream 16822 true Chr04: 6976419-6993240 Sorghum bicolor
Sobic.004G084200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6976419-6986418 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178100 5267 Panicoideae View MSA
124588022 5269 Grass View MSA
122042034 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121349229 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.371        
cufflinks 0.089       Low
cufflinks 0.225       Low
cufflinks 0.489        
cufflinks 1.025        
cufflinks 1.398       High
cufflinks 0.698        
cufflinks 0.311        
cufflinks 0.957        
cufflinks 1.003        
cufflinks 0.794        
cufflinks 0.594        
cufflinks 1.405       High
cufflinks 0.632        
cufflinks 1.011        
cufflinks 0.231       Low
cufflinks 0.809        
cufflinks 0.77        
cufflinks 0.329        
cufflinks 0.69        
cufflinks 2.317       High
cufflinks 0.631        
cufflinks 0.78        
cufflinks 0.697        
cufflinks 0.126       Low
cufflinks 0.092       Low
cufflinks 0.647        
cufflinks 0.868        
cufflinks 0.451        
cufflinks 0.792        

0 Strain