Gene : Sobic.004G118000 S. bicolor v3.1.1
Defline:  (1 of 5) PTHR18966//PTHR18966:SF223 - IONOTROPIC GLUTAMATE RECEPTOR // SUBFAMILY NOT NAMED Genomic Order:  1222
Name:  ? Sobic.004G118000 Secondary Identifier:  ? PAC:37929011
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G118000 0.5kb upstream 0.5kb upstream 5121 true Chr04: 12436728-12441848 Sorghum bicolor
Sobic.004G118000 0.5kb upstream 0.5kb upstream 500 false Chr04: 12441349-12441848 Sorghum bicolor
Sobic.004G118000 0.5kb downstream 0.5kb downstream 5121 true Chr04: 12436228-12441348 Sorghum bicolor
Sobic.004G118000 0.5kb downstream 0.5kb downstream 500 false Chr04: 12436228-12436727 Sorghum bicolor
Sobic.004G118000 1.0kb upstream 1.0kb upstream 5621 true Chr04: 12436728-12442348 Sorghum bicolor
Sobic.004G118000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 12441349-12442348 Sorghum bicolor
Sobic.004G118000 1.0kb downstream 1.0kb downstream 5621 true Chr04: 12435728-12441348 Sorghum bicolor
Sobic.004G118000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 12435728-12436727 Sorghum bicolor
Sobic.004G118000 2.0kb upstream 2.0kb upstream 6621 true Chr04: 12436728-12443348 Sorghum bicolor
Sobic.004G118000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 12441349-12443348 Sorghum bicolor
Sobic.004G118000 2.0kb downstream 2.0kb downstream 6621 true Chr04: 12434728-12441348 Sorghum bicolor
Sobic.004G118000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 12434728-12436727 Sorghum bicolor
Sobic.004G118000 5.0kb upstream 5.0kb upstream 9621 true Chr04: 12436728-12446348 Sorghum bicolor
Sobic.004G118000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 12441349-12446348 Sorghum bicolor
Sobic.004G118000 5.0kb downstream 5.0kb downstream 9621 true Chr04: 12431728-12441348 Sorghum bicolor
Sobic.004G118000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 12431728-12436727 Sorghum bicolor
Sobic.004G118000 10.0kb upstream 10.0kb upstream 14621 true Chr04: 12436728-12451348 Sorghum bicolor
Sobic.004G118000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 12441349-12451348 Sorghum bicolor
Sobic.004G118000 10.0kb downstream 10.0kb downstream 14621 true Chr04: 12426728-12441348 Sorghum bicolor
Sobic.004G118000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 12426728-12436727 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194507 5267 Panicoideae View MSA
124589593 5269 Grass View MSA
122051662 5273 Angiosperm View MSA
121351346 5274 Embryophyte View MSA
123428796 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 0.178       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.046     Low  
cufflinks 0.003     Low Low
cufflinks 0.065     Low High
cufflinks 0.063     Low High
cufflinks 0.028     Low  
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.058     Low High
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.044     Low  
cufflinks 0.08     Low High
cufflinks 0.058       High
cufflinks 0.014     Low  
cufflinks 0.025     Low  
cufflinks 0.01     Low  
cufflinks 0.01     Low  
cufflinks 0.007     Low  

0 Strain