Gene : Sobic.004G106400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23257//PTHR23257:SF435 - SERINE-THREONINE PROTEIN KINASE // MITOGEN ACTIVATED PROTEIN KINASE KINASE KINASE-LIKE PROTEIN Genomic Order:  1106
Name:  ? Sobic.004G106400 Secondary Identifier:  ? PAC:37932142
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G106400 0.5kb upstream 0.5kb upstream 19514 true Chr04: 10138033-10157546 Sorghum bicolor
Sobic.004G106400 0.5kb upstream 0.5kb upstream 500 false Chr04: 10138033-10138532 Sorghum bicolor
Sobic.004G106400 0.5kb downstream 0.5kb downstream 19514 true Chr04: 10138533-10158046 Sorghum bicolor
Sobic.004G106400 0.5kb downstream 0.5kb downstream 500 false Chr04: 10157547-10158046 Sorghum bicolor
Sobic.004G106400 1.0kb upstream 1.0kb upstream 20014 true Chr04: 10137533-10157546 Sorghum bicolor
Sobic.004G106400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 10137533-10138532 Sorghum bicolor
Sobic.004G106400 1.0kb downstream 1.0kb downstream 20014 true Chr04: 10138533-10158546 Sorghum bicolor
Sobic.004G106400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 10157547-10158546 Sorghum bicolor
Sobic.004G106400 2.0kb upstream 2.0kb upstream 21014 true Chr04: 10136533-10157546 Sorghum bicolor
Sobic.004G106400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 10136533-10138532 Sorghum bicolor
Sobic.004G106400 2.0kb downstream 2.0kb downstream 21014 true Chr04: 10138533-10159546 Sorghum bicolor
Sobic.004G106400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 10157547-10159546 Sorghum bicolor
Sobic.004G106400 5.0kb upstream 5.0kb upstream 24014 true Chr04: 10133533-10157546 Sorghum bicolor
Sobic.004G106400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 10133533-10138532 Sorghum bicolor
Sobic.004G106400 5.0kb downstream 5.0kb downstream 24014 true Chr04: 10138533-10162546 Sorghum bicolor
Sobic.004G106400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 10157547-10162546 Sorghum bicolor
Sobic.004G106400 10.0kb upstream 10.0kb upstream 29014 true Chr04: 10128533-10157546 Sorghum bicolor
Sobic.004G106400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 10128533-10138532 Sorghum bicolor
Sobic.004G106400 10.0kb downstream 10.0kb downstream 29014 true Chr04: 10138533-10167546 Sorghum bicolor
Sobic.004G106400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 10157547-10167546 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188613 5267 Panicoideae View MSA
124572071 5269 Grass View MSA
122048343 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351351 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.307       Low
cufflinks 0.417       Low
cufflinks 0.601       Low
cufflinks 0.598       Low
cufflinks 2.17       High
cufflinks 1.131        
cufflinks 0.951        
cufflinks 0.717        
cufflinks 1.402        
cufflinks 1.582        
cufflinks 1.792        
cufflinks 1.752        
cufflinks 1.599        
cufflinks 1.427        
cufflinks 1.282        
cufflinks 0.522       Low
cufflinks 0.838        
cufflinks 0.97        
cufflinks 0.647        
cufflinks 0.82        
cufflinks 2.221       High
cufflinks 1.532        
cufflinks 1.47        
cufflinks 1.508        
cufflinks 0.712        
cufflinks 0.39       Low
cufflinks 1.613        
cufflinks 0.172       Low
cufflinks 1.219        
cufflinks 1.354        

0 Strain