Gene : Sobic.004G107200 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED Genomic Order:  1114
Name:  ? Sobic.004G107200 Secondary Identifier:  ? PAC:37933203
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G107200 0.5kb upstream 0.5kb upstream 12148 true Chr04: 10244892-10257039 Sorghum bicolor
Sobic.004G107200 0.5kb upstream 0.5kb upstream 500 false Chr04: 10256540-10257039 Sorghum bicolor
Sobic.004G107200 0.5kb downstream 0.5kb downstream 12148 true Chr04: 10244392-10256539 Sorghum bicolor
Sobic.004G107200 0.5kb downstream 0.5kb downstream 500 false Chr04: 10244392-10244891 Sorghum bicolor
Sobic.004G107200 1.0kb upstream 1.0kb upstream 12648 true Chr04: 10244892-10257539 Sorghum bicolor
Sobic.004G107200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 10256540-10257539 Sorghum bicolor
Sobic.004G107200 1.0kb downstream 1.0kb downstream 12648 true Chr04: 10243892-10256539 Sorghum bicolor
Sobic.004G107200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 10243892-10244891 Sorghum bicolor
Sobic.004G107200 2.0kb upstream 2.0kb upstream 13648 true Chr04: 10244892-10258539 Sorghum bicolor
Sobic.004G107200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 10256540-10258539 Sorghum bicolor
Sobic.004G107200 2.0kb downstream 2.0kb downstream 13648 true Chr04: 10242892-10256539 Sorghum bicolor
Sobic.004G107200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 10242892-10244891 Sorghum bicolor
Sobic.004G107200 5.0kb upstream 5.0kb upstream 16648 true Chr04: 10244892-10261539 Sorghum bicolor
Sobic.004G107200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 10256540-10261539 Sorghum bicolor
Sobic.004G107200 5.0kb downstream 5.0kb downstream 16648 true Chr04: 10239892-10256539 Sorghum bicolor
Sobic.004G107200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 10239892-10244891 Sorghum bicolor
Sobic.004G107200 10.0kb upstream 10.0kb upstream 21648 true Chr04: 10244892-10266539 Sorghum bicolor
Sobic.004G107200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 10256540-10266539 Sorghum bicolor
Sobic.004G107200 10.0kb downstream 10.0kb downstream 21648 true Chr04: 10234892-10256539 Sorghum bicolor
Sobic.004G107200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 10234892-10244891 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177025 5267 Panicoideae View MSA
124586406 5269 Grass View MSA
122046939 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.37        
cufflinks 0.909       Low
cufflinks 1.518       Low
cufflinks 2.036        
cufflinks 7.018       High
cufflinks 1.99        
cufflinks 3.704        
cufflinks 1.631       Low
cufflinks 4.712        
cufflinks 5.091        
cufflinks 3.223        
cufflinks 3.439        
cufflinks 4.166        
cufflinks 2.639        
cufflinks 3.947        
cufflinks 0.998       Low
cufflinks 3.663        
cufflinks 3.668        
cufflinks 1.4       Low
cufflinks 3.698        
cufflinks 10.102       High
cufflinks 2.979        
cufflinks 3.531        
cufflinks 3.365        
cufflinks 2.844        
cufflinks 1.111       Low
cufflinks 3.137        
cufflinks 1.509       Low
cufflinks 2.636        
cufflinks 5.24       High

0 Strain