Gene : Sobic.004G101500 S. bicolor v3.1.1
Defline:  (1 of 1) K10639 - E3 ubiquitin-protein ligase CCNP1IP1 [EC:6.3.2.19] (CCNB1IP1, HEI10) Genomic Order:  1054
Name:  ? Sobic.004G101500 Secondary Identifier:  ? PAC:37928893
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G101500 0.5kb upstream 0.5kb upstream 5993 true Chr04: 9374024-9380016 Sorghum bicolor
Sobic.004G101500 0.5kb upstream 0.5kb upstream 500 false Chr04: 9379517-9380016 Sorghum bicolor
Sobic.004G101500 0.5kb downstream 0.5kb downstream 5993 true Chr04: 9373524-9379516 Sorghum bicolor
Sobic.004G101500 0.5kb downstream 0.5kb downstream 500 false Chr04: 9373524-9374023 Sorghum bicolor
Sobic.004G101500 1.0kb upstream 1.0kb upstream 6493 true Chr04: 9374024-9380516 Sorghum bicolor
Sobic.004G101500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 9379517-9380516 Sorghum bicolor
Sobic.004G101500 1.0kb downstream 1.0kb downstream 6493 true Chr04: 9373024-9379516 Sorghum bicolor
Sobic.004G101500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 9373024-9374023 Sorghum bicolor
Sobic.004G101500 2.0kb upstream 2.0kb upstream 7493 true Chr04: 9374024-9381516 Sorghum bicolor
Sobic.004G101500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 9379517-9381516 Sorghum bicolor
Sobic.004G101500 2.0kb downstream 2.0kb downstream 7493 true Chr04: 9372024-9379516 Sorghum bicolor
Sobic.004G101500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 9372024-9374023 Sorghum bicolor
Sobic.004G101500 5.0kb upstream 5.0kb upstream 10493 true Chr04: 9374024-9384516 Sorghum bicolor
Sobic.004G101500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 9379517-9384516 Sorghum bicolor
Sobic.004G101500 5.0kb downstream 5.0kb downstream 10493 true Chr04: 9369024-9379516 Sorghum bicolor
Sobic.004G101500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 9369024-9374023 Sorghum bicolor
Sobic.004G101500 10.0kb upstream 10.0kb upstream 15493 true Chr04: 9374024-9389516 Sorghum bicolor
Sobic.004G101500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 9379517-9389516 Sorghum bicolor
Sobic.004G101500 10.0kb downstream 10.0kb downstream 15493 true Chr04: 9364024-9379516 Sorghum bicolor
Sobic.004G101500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 9364024-9374023 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179606 5267 Panicoideae View MSA
124579363 5269 Grass View MSA
122042121 5273 Angiosperm View MSA
121345385 5274 Embryophyte View MSA
123428682 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.523       High
cufflinks 0.042       Low
cufflinks 0.178        
cufflinks 0.239        
cufflinks 0.114        
cufflinks 0.318        
cufflinks 0.188        
cufflinks 0.034     Low Low
cufflinks 0.701       High
cufflinks 0.551       High
cufflinks 0.142        
cufflinks 0.407       High
cufflinks 0.445       High
cufflinks 0.316        
cufflinks 0.525       High
cufflinks 0.127        
cufflinks 0.171        
cufflinks 0.168        
cufflinks 0.098        
cufflinks 0.196        
cufflinks 0.305        
cufflinks 0.198        
cufflinks 0.308        
cufflinks 0.296        
cufflinks 0.047     Low Low
cufflinks 0.034     Low Low
cufflinks 0.197        
cufflinks 0.115        
cufflinks 0.054     Low Low
cufflinks 0.445       High

0 Strain