Protein Family : DNA binding protein, putative, expressed 124579363

Method ID:  5269 Method Name:  Grass
Sequence Alignment:  View MSA Member Count:  21

21 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Traes_6AL_B13BFCFF8 (1 of 3) PTHR23041:SF65 - E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG T. aestivum v2.2 4560   ta_iwgsc_6al_v1_5776267: 12700-17259
Traes_6BS_27266CEFE (1 of 3) PTHR23041:SF65 - E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG T. aestivum v2.2 2800   ta_iwgsc_6bs_v1_3005361: 728-3527
Traes_6DS_18307F490 (1 of 1) KOG4739 - Uncharacterized protein involved in synaptonemal complex formation T. aestivum v2.2 4774   ta_iwgsc_6ds_v1_2058318: 1-4774
Seita.4G180400 (1 of 1) PTHR23041:SF65 - E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG S. italica v2.2 5367   scaffold_4: 29179123-29184489
Bradi3g08880 (1 of 1) K10639 - E3 ubiquitin-protein ligase CCNP1IP1 [EC:6.3.2.19] (CCNB1IP1, HEI10) B. distachyon v3.1 4958   Bd3: 6983429-6988386
LOC_Os02g13810 (1 of 1) K10639 - E3 ubiquitin-protein ligase CCNP1IP1 [EC:6.3.2.19] (CCNB1IP1, HEI10) O. sativa v7.0 4689   Chr2: 7466238-7470926
Zm00008a021624 (1 of 1) K10639 - E3 ubiquitin-protein ligase CCNP1IP1 [EC:6.3.2.19] (CCNB1IP1, HEI10) Z. mays PH207 v1.1 6463   chr05: 148669108-148675570
Zm00008a030212 (1 of 2) PTHR23041:SF65 - E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG Z. mays PH207 v1.1 4213   chr08: 19039450-19043662
Pavir.1KG423000 (1 of 2) K10639 - E3 ubiquitin-protein ligase CCNP1IP1 [EC:6.3.2.19] (CCNB1IP1, HEI10) P. virgatum v4.1 6231   Chr01K: 66324726-66330956
Pavir.4KG264700 (1 of 2) K10639 - E3 ubiquitin-protein ligase CCNP1IP1 [EC:6.3.2.19] (CCNB1IP1, HEI10) P. virgatum v4.1 6381   Chr04K: 45624056-45630436
Sobic.004G101500 (1 of 1) K10639 - E3 ubiquitin-protein ligase CCNP1IP1 [EC:6.3.2.19] (CCNB1IP1, HEI10) S. bicolor v3.1.1 5493   Chr04: 9374024-9379516
HORVU6Hr1G040680 (1 of 1) K10639 - E3 ubiquitin-protein ligase CCNP1IP1 [EC:6.3.2.19] (CCNB1IP1, HEI10) H. vulgare r1 9296   chr6H: 220092201-220101496
Zm00001d012082 (1 of 2) PTHR11006//PTHR11006:SF70 - PROTEIN ARGININE N-METHYLTRANSFERASE // SUBFAMILY NOT NAMED Z. mays RefGen_V4 4531   8: 167829118-167833648
Zm00001d016254 (1 of 1) K10639 - E3 ubiquitin-protein ligase CCNP1IP1 [EC:6.3.2.19] (CCNB1IP1, HEI10) Z. mays RefGen_V4 6084   5: 153614366-153620449
Pahal.4G114300 (1 of 1) K10639 - E3 ubiquitin-protein ligase CCNP1IP1 [EC:6.3.2.19] (CCNB1IP1, HEI10) P. hallii v3.1 4567   Chr04: 8754342-8758908
PhHAL.4G114900 (1 of 1) K10639 - E3 ubiquitin-protein ligase CCNP1IP1 [EC:6.3.2.19] (CCNB1IP1, HEI10) P. hallii HAL v2.1 4674   Chr04: 8569528-8574201
Misin07G105900 (1 of 2) K10639 - E3 ubiquitin-protein ligase CCNP1IP1 [EC:6.3.2.19] (CCNB1IP1, HEI10) M. sinensis v7.1 5337   Chr07: 20903704-20909040
Misin08G099900 (1 of 2) K10639 - E3 ubiquitin-protein ligase CCNP1IP1 [EC:6.3.2.19] (CCNB1IP1, HEI10) M. sinensis v7.1 6097   Chr08: 25123282-25129378
OsKitaake02g099700 (1 of 1) K10639 - E3 ubiquitin-protein ligase CCNP1IP1 [EC:6.3.2.19] (CCNB1IP1, HEI10) O. sativa Kitaake v3.1 2012   Chr2: 7555929-7557940
Sevir.4G148500 (1 of 1) K10639 - E3 ubiquitin-protein ligase CCNP1IP1 [EC:6.3.2.19] (CCNB1IP1, HEI10) S. viridis v2.1 5303   Chr_04: 28434612-28439914
Brast04G242800 (1 of 1) PTHR23041:SF65 - E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG B. stacei v1.1 5632   Chr04: 18101522-18107153

21 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Traes_6DS_18307F490.2 T. aestivum v2.2 124579363 DNA binding protein, putative, expressed 3 5269 Grass
Traes_6BS_27266CEFE.1 T. aestivum v2.2 124579363 DNA binding protein, putative, expressed 3 5269 Grass
Traes_6AL_B13BFCFF8.2 T. aestivum v2.2 124579363 DNA binding protein, putative, expressed 3 5269 Grass
Bradi3g08880.3.p B. distachyon v3.1 124579363 DNA binding protein, putative, expressed 1 5269 Grass
Brast04G242800.1.p B. stacei v1.1 124579363 DNA binding protein, putative, expressed 1 5269 Grass
LOC_Os02g13810.1 O. sativa v7.0 124579363 DNA binding protein, putative, expressed 1 5269 Grass
Zm00008a030212_P01 Z. mays PH207 v1.1 124579363 DNA binding protein, putative, expressed 2 5269 Grass
Zm00008a021624_P01 Z. mays PH207 v1.1 124579363 DNA binding protein, putative, expressed 2 5269 Grass
Pavir.4KG264700.1.p P. virgatum v4.1 124579363 DNA binding protein, putative, expressed 2 5269 Grass
Pavir.1KG423000.1.p P. virgatum v4.1 124579363 DNA binding protein, putative, expressed 2 5269 Grass
Sobic.004G101500.1.p S. bicolor v3.1.1 124579363 DNA binding protein, putative, expressed 1 5269 Grass
HORVU6Hr1G040680.2 H. vulgare r1 124579363 DNA binding protein, putative, expressed 1 5269 Grass
Zm00001d012082_P001 Z. mays RefGen_V4 124579363 DNA binding protein, putative, expressed 2 5269 Grass
Zm00001d016254_P001 Z. mays RefGen_V4 124579363 DNA binding protein, putative, expressed 2 5269 Grass
Pahal.4G114300.1.p P. hallii v3.1 124579363 DNA binding protein, putative, expressed 1 5269 Grass
PhHAL.4G114900.1.p P. hallii HAL v2.1 124579363 DNA binding protein, putative, expressed 1 5269 Grass
Misin08G099900.1.p M. sinensis v7.1 124579363 DNA binding protein, putative, expressed 2 5269 Grass
Misin07G105900.1.p M. sinensis v7.1 124579363 DNA binding protein, putative, expressed 2 5269 Grass
OsKitaake02g099700.1.p O. sativa Kitaake v3.1 124579363 DNA binding protein, putative, expressed 1 5269 Grass
Sevir.4G148500.1.p S. viridis v2.1 124579363 DNA binding protein, putative, expressed 1 5269 Grass
Seita.4G180400.1.p S. italica v2.2 124579363 DNA binding protein, putative, expressed 1 5269 Grass