Gene : Sobic.004G097300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR20889//PTHR20889:SF5 - PHOSPHATASE, ORPHAN 1, 2 // SUBFAMILY NOT NAMED Genomic Order:  1011
Name:  ? Sobic.004G097300 Secondary Identifier:  ? PAC:37932684
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-5083 Sorghum bicolor pathologic  
Sbicolor PWY-6348 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G097300 0.5kb upstream 0.5kb upstream 2182 true Chr04: 8639202-8641383 Sorghum bicolor
Sobic.004G097300 0.5kb upstream 0.5kb upstream 500 false Chr04: 8639202-8639701 Sorghum bicolor
Sobic.004G097300 0.5kb downstream 0.5kb downstream 2182 true Chr04: 8639702-8641883 Sorghum bicolor
Sobic.004G097300 0.5kb downstream 0.5kb downstream 500 false Chr04: 8641384-8641883 Sorghum bicolor
Sobic.004G097300 1.0kb upstream 1.0kb upstream 2682 true Chr04: 8638702-8641383 Sorghum bicolor
Sobic.004G097300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 8638702-8639701 Sorghum bicolor
Sobic.004G097300 1.0kb downstream 1.0kb downstream 2682 true Chr04: 8639702-8642383 Sorghum bicolor
Sobic.004G097300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 8641384-8642383 Sorghum bicolor
Sobic.004G097300 2.0kb upstream 2.0kb upstream 3682 true Chr04: 8637702-8641383 Sorghum bicolor
Sobic.004G097300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 8637702-8639701 Sorghum bicolor
Sobic.004G097300 2.0kb downstream 2.0kb downstream 3682 true Chr04: 8639702-8643383 Sorghum bicolor
Sobic.004G097300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 8641384-8643383 Sorghum bicolor
Sobic.004G097300 5.0kb upstream 5.0kb upstream 6682 true Chr04: 8634702-8641383 Sorghum bicolor
Sobic.004G097300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 8634702-8639701 Sorghum bicolor
Sobic.004G097300 5.0kb downstream 5.0kb downstream 6682 true Chr04: 8639702-8646383 Sorghum bicolor
Sobic.004G097300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 8641384-8646383 Sorghum bicolor
Sobic.004G097300 10.0kb upstream 10.0kb upstream 11682 true Chr04: 8629702-8641383 Sorghum bicolor
Sobic.004G097300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 8629702-8639701 Sorghum bicolor
Sobic.004G097300 10.0kb downstream 10.0kb downstream 11682 true Chr04: 8639702-8651383 Sorghum bicolor
Sobic.004G097300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 8641384-8651383 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041363 5273 Angiosperm View MSA
122180505 5267 Panicoideae View MSA
124572114 5269 Grass View MSA
121350912 5274 Embryophyte View MSA
123426221 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.105        
cufflinks 0.456        
cufflinks 0.009     Low Low
cufflinks 0.063     Low  
cufflinks 0.088        
cufflinks 0.196        
cufflinks 1.48       High
cufflinks 1.927       High
cufflinks 1.246        
cufflinks 1.168        
cufflinks 1.665       High
cufflinks 0.859        
cufflinks 0.388        
cufflinks 2.036       High
cufflinks 0.041     Low Low
cufflinks 0.053     Low  
cufflinks 1.813       High
cufflinks 0.763        
cufflinks 1.223        
cufflinks 0.729        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.109     Low  
cufflinks 0.514        
cufflinks 0.497        
cufflinks 0.807        
cufflinks 0.525        
cufflinks 0.137        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.47        
cufflinks 0.012     Low Low

0 Strain