Gene : Sobic.009G025700 S. bicolor v3.1.1
Defline:  (1 of 2) 5.5.1.9 - Cycloeucalenol cycloisomerase / Cycloeucalenol--obtusifoliol isomerase Genomic Order:  258
Name:  ? Sobic.009G025700 Secondary Identifier:  ? PAC:37919420
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-2541 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G025700 0.5kb upstream 0.5kb upstream 6068 true Chr09: 2269877-2275944 Sorghum bicolor
Sobic.009G025700 0.5kb upstream 0.5kb upstream 500 false Chr09: 2269877-2270376 Sorghum bicolor
Sobic.009G025700 0.5kb downstream 0.5kb downstream 6068 true Chr09: 2270377-2276444 Sorghum bicolor
Sobic.009G025700 0.5kb downstream 0.5kb downstream 500 false Chr09: 2275945-2276444 Sorghum bicolor
Sobic.009G025700 1.0kb upstream 1.0kb upstream 6568 true Chr09: 2269377-2275944 Sorghum bicolor
Sobic.009G025700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 2269377-2270376 Sorghum bicolor
Sobic.009G025700 1.0kb downstream 1.0kb downstream 6568 true Chr09: 2270377-2276944 Sorghum bicolor
Sobic.009G025700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 2275945-2276944 Sorghum bicolor
Sobic.009G025700 2.0kb upstream 2.0kb upstream 7568 true Chr09: 2268377-2275944 Sorghum bicolor
Sobic.009G025700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 2268377-2270376 Sorghum bicolor
Sobic.009G025700 2.0kb downstream 2.0kb downstream 7568 true Chr09: 2270377-2277944 Sorghum bicolor
Sobic.009G025700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 2275945-2277944 Sorghum bicolor
Sobic.009G025700 5.0kb upstream 5.0kb upstream 10568 true Chr09: 2265377-2275944 Sorghum bicolor
Sobic.009G025700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 2265377-2270376 Sorghum bicolor
Sobic.009G025700 5.0kb downstream 5.0kb downstream 10568 true Chr09: 2270377-2280944 Sorghum bicolor
Sobic.009G025700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 2275945-2280944 Sorghum bicolor
Sobic.009G025700 10.0kb upstream 10.0kb upstream 15568 true Chr09: 2260377-2275944 Sorghum bicolor
Sobic.009G025700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 2260377-2270376 Sorghum bicolor
Sobic.009G025700 10.0kb downstream 10.0kb downstream 15568 true Chr09: 2270377-2285944 Sorghum bicolor
Sobic.009G025700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 2275945-2285944 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186657 5267 Panicoideae View MSA
124583479 5269 Grass View MSA
122046906 5273 Angiosperm View MSA
121345110 5274 Embryophyte View MSA
123424971 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.957        
cufflinks 0.042       Low
cufflinks 0.165       Low
cufflinks 0.24       Low
cufflinks 1.615        
cufflinks 1.401        
cufflinks 2.072        
cufflinks 0.587        
cufflinks 0.92        
cufflinks 1.004        
cufflinks 2.679        
cufflinks 2.561        
cufflinks 1.205        
cufflinks 2.089        
cufflinks 2.13        
cufflinks 0.099       Low
cufflinks 2.41        
cufflinks 2.406        
cufflinks 0.214       Low
cufflinks 2.158        
cufflinks 2.164        
cufflinks 4.453       High
cufflinks 2.849        
cufflinks 3.235        
cufflinks 0.008     Low Low
cufflinks 0.049       Low
cufflinks 3.599        
cufflinks 0.158       Low
cufflinks 2.874        
cufflinks 1.769        

0 Strain