Gene : Sobic.004G151800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12526:SF2 - SUCROSE-PHOSPHATASE 1-RELATED Genomic Order:  1577
Name:  ? Sobic.004G151800 Secondary Identifier:  ? PAC:37930992
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-7238 Sorghum bicolor pathologic  
Sbicolor SUCSYN-PWY Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G151800 0.5kb upstream 0.5kb upstream 5916 true Chr04: 48035883-48041798 Sorghum bicolor
Sobic.004G151800 0.5kb upstream 0.5kb upstream 500 false Chr04: 48035883-48036382 Sorghum bicolor
Sobic.004G151800 0.5kb downstream 0.5kb downstream 5916 true Chr04: 48036383-48042298 Sorghum bicolor
Sobic.004G151800 0.5kb downstream 0.5kb downstream 500 false Chr04: 48041799-48042298 Sorghum bicolor
Sobic.004G151800 1.0kb upstream 1.0kb upstream 6416 true Chr04: 48035383-48041798 Sorghum bicolor
Sobic.004G151800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 48035383-48036382 Sorghum bicolor
Sobic.004G151800 1.0kb downstream 1.0kb downstream 6416 true Chr04: 48036383-48042798 Sorghum bicolor
Sobic.004G151800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 48041799-48042798 Sorghum bicolor
Sobic.004G151800 2.0kb upstream 2.0kb upstream 7416 true Chr04: 48034383-48041798 Sorghum bicolor
Sobic.004G151800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 48034383-48036382 Sorghum bicolor
Sobic.004G151800 2.0kb downstream 2.0kb downstream 7416 true Chr04: 48036383-48043798 Sorghum bicolor
Sobic.004G151800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 48041799-48043798 Sorghum bicolor
Sobic.004G151800 5.0kb upstream 5.0kb upstream 10416 true Chr04: 48031383-48041798 Sorghum bicolor
Sobic.004G151800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 48031383-48036382 Sorghum bicolor
Sobic.004G151800 5.0kb downstream 5.0kb downstream 10416 true Chr04: 48036383-48046798 Sorghum bicolor
Sobic.004G151800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 48041799-48046798 Sorghum bicolor
Sobic.004G151800 10.0kb upstream 10.0kb upstream 15416 true Chr04: 48026383-48041798 Sorghum bicolor
Sobic.004G151800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 48026383-48036382 Sorghum bicolor
Sobic.004G151800 10.0kb downstream 10.0kb downstream 15416 true Chr04: 48036383-48051798 Sorghum bicolor
Sobic.004G151800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 48041799-48051798 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193001 5267 Panicoideae View MSA
124591146 5269 Grass View MSA
122041652 5273 Angiosperm View MSA
123428930 5275 Viridiplantae View MSA
121349182 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.165       Low
cufflinks 44.818     High High
cufflinks 16.792     High High
cufflinks 6.605        
cufflinks 4.82        
cufflinks 4.456        
cufflinks 17.474     High High
cufflinks 17.962     High High
cufflinks 5.613        
cufflinks 6.767        
cufflinks 6.538        
cufflinks 5.345        
cufflinks 7.355        
cufflinks 6.046        
cufflinks 12.072     High  
cufflinks 28.65     High High
cufflinks 19.293     High High
cufflinks 17.847     High High
cufflinks 11.503     High  
cufflinks 10.964        
cufflinks 3.792       Low
cufflinks 7.445        
cufflinks 7.614        
cufflinks 7.595        
cufflinks 27.434     High High
cufflinks 40.869     High High
cufflinks 4.563        
cufflinks 2.893       Low
cufflinks 7.49        
cufflinks 7.82        

0 Strain