Gene : Sobic.009G057300 S. bicolor v3.1.1
Defline:  (1 of 3) PTHR10909//PTHR10909:SF331 - ELECTRON TRANSPORT OXIDOREDUCTASE // ACYL-COENZYME A OXIDASE 4, PEROXISOMAL Genomic Order:  589
Name:  ? Sobic.009G057300 Secondary Identifier:  ? PAC:37921185
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-5136 Sorghum bicolor pathologic  
Sbicolor PWY-561 Sorghum bicolor pathologic  
Sbicolor PWY-6837 Sorghum bicolor pathologic  
Sbicolor PWY-735 Sorghum bicolor pathologic  
Sbicolor PWY-7606 Sorghum bicolor pathologic  
Sbicolor PWY-7726 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G057300 0.5kb upstream 0.5kb upstream 5040 true Chr09: 5860396-5865435 Sorghum bicolor
Sobic.009G057300 0.5kb upstream 0.5kb upstream 500 false Chr09: 5860396-5860895 Sorghum bicolor
Sobic.009G057300 0.5kb downstream 0.5kb downstream 5040 true Chr09: 5860896-5865935 Sorghum bicolor
Sobic.009G057300 0.5kb downstream 0.5kb downstream 500 false Chr09: 5865436-5865935 Sorghum bicolor
Sobic.009G057300 1.0kb upstream 1.0kb upstream 5540 true Chr09: 5859896-5865435 Sorghum bicolor
Sobic.009G057300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 5859896-5860895 Sorghum bicolor
Sobic.009G057300 1.0kb downstream 1.0kb downstream 5540 true Chr09: 5860896-5866435 Sorghum bicolor
Sobic.009G057300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 5865436-5866435 Sorghum bicolor
Sobic.009G057300 2.0kb upstream 2.0kb upstream 6540 true Chr09: 5858896-5865435 Sorghum bicolor
Sobic.009G057300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 5858896-5860895 Sorghum bicolor
Sobic.009G057300 2.0kb downstream 2.0kb downstream 6540 true Chr09: 5860896-5867435 Sorghum bicolor
Sobic.009G057300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 5865436-5867435 Sorghum bicolor
Sobic.009G057300 5.0kb upstream 5.0kb upstream 9540 true Chr09: 5855896-5865435 Sorghum bicolor
Sobic.009G057300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 5855896-5860895 Sorghum bicolor
Sobic.009G057300 5.0kb downstream 5.0kb downstream 9540 true Chr09: 5860896-5870435 Sorghum bicolor
Sobic.009G057300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 5865436-5870435 Sorghum bicolor
Sobic.009G057300 10.0kb upstream 10.0kb upstream 14540 true Chr09: 5850896-5865435 Sorghum bicolor
Sobic.009G057300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 5850896-5860895 Sorghum bicolor
Sobic.009G057300 10.0kb downstream 10.0kb downstream 14540 true Chr09: 5860896-5875435 Sorghum bicolor
Sobic.009G057300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 5865436-5875435 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180078 5267 Panicoideae View MSA
124568476 5269 Grass View MSA
122043325 5273 Angiosperm View MSA
121347950 5274 Embryophyte View MSA
123424845 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.719     High  
cufflinks 2.0       Low
cufflinks 8.051        
cufflinks 12.16     High  
cufflinks 7.006        
cufflinks 10.239        
cufflinks 7.545        
cufflinks 5.077       Low
cufflinks 13.868     High  
cufflinks 13.736     High  
cufflinks 14.908     High  
cufflinks 18.23     High High
cufflinks 10.944        
cufflinks 15.582     High High
cufflinks 8.663        
cufflinks 6.558        
cufflinks 7.239        
cufflinks 8.438        
cufflinks 5.387       Low
cufflinks 10.548        
cufflinks 11.515        
cufflinks 14.14     High  
cufflinks 15.868     High High
cufflinks 15.004     High  
cufflinks 4.848       Low
cufflinks 2.405       Low
cufflinks 18.279     High High
cufflinks 20.855     High High
cufflinks 5.713        
cufflinks 8.365        

0 Strain