Gene : Sobic.009G062000 S. bicolor v3.1.1
Defline:  (1 of 1) K03946 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2 (NDUFA2) Genomic Order:  635
Name:  ? Sobic.009G062000 Secondary Identifier:  ? PAC:37920557
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G062000 0.5kb upstream 0.5kb upstream 3755 true Chr09: 6508952-6512706 Sorghum bicolor
Sobic.009G062000 0.5kb upstream 0.5kb upstream 500 false Chr09: 6508952-6509451 Sorghum bicolor
Sobic.009G062000 0.5kb downstream 0.5kb downstream 3755 true Chr09: 6509452-6513206 Sorghum bicolor
Sobic.009G062000 0.5kb downstream 0.5kb downstream 500 false Chr09: 6512707-6513206 Sorghum bicolor
Sobic.009G062000 1.0kb upstream 1.0kb upstream 4255 true Chr09: 6508452-6512706 Sorghum bicolor
Sobic.009G062000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 6508452-6509451 Sorghum bicolor
Sobic.009G062000 1.0kb downstream 1.0kb downstream 4255 true Chr09: 6509452-6513706 Sorghum bicolor
Sobic.009G062000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 6512707-6513706 Sorghum bicolor
Sobic.009G062000 2.0kb upstream 2.0kb upstream 5255 true Chr09: 6507452-6512706 Sorghum bicolor
Sobic.009G062000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 6507452-6509451 Sorghum bicolor
Sobic.009G062000 2.0kb downstream 2.0kb downstream 5255 true Chr09: 6509452-6514706 Sorghum bicolor
Sobic.009G062000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 6512707-6514706 Sorghum bicolor
Sobic.009G062000 5.0kb upstream 5.0kb upstream 8255 true Chr09: 6504452-6512706 Sorghum bicolor
Sobic.009G062000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 6504452-6509451 Sorghum bicolor
Sobic.009G062000 5.0kb downstream 5.0kb downstream 8255 true Chr09: 6509452-6517706 Sorghum bicolor
Sobic.009G062000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 6512707-6517706 Sorghum bicolor
Sobic.009G062000 10.0kb upstream 10.0kb upstream 13255 true Chr09: 6499452-6512706 Sorghum bicolor
Sobic.009G062000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 6499452-6509451 Sorghum bicolor
Sobic.009G062000 10.0kb downstream 10.0kb downstream 13255 true Chr09: 6509452-6522706 Sorghum bicolor
Sobic.009G062000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 6512707-6522706 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183888 5267 Panicoideae View MSA
124586524 5269 Grass View MSA
122045134 5273 Angiosperm View MSA
121343920 5274 Embryophyte View MSA
123424630 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.601     High High
cufflinks 5.35       Low
cufflinks 6.149       Low
cufflinks 10.468        
cufflinks 11.103        
cufflinks 7.897        
cufflinks 12.295     High  
cufflinks 7.126        
cufflinks 6.628       Low
cufflinks 8.773        
cufflinks 11.333        
cufflinks 10.183        
cufflinks 5.998       Low
cufflinks 13.208     High  
cufflinks 11.08        
cufflinks 7.918        
cufflinks 12.751     High  
cufflinks 13.651     High  
cufflinks 6.563       Low
cufflinks 11.051        
cufflinks 9.666        
cufflinks 18.707     High High
cufflinks 13.108     High  
cufflinks 12.956     High  
cufflinks 5.041       Low
cufflinks 5.745       Low
cufflinks 9.337        
cufflinks 12.896     High  
cufflinks 12.079     High  
cufflinks 9.581        

0 Strain