Gene : Sobic.004G179300 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11689//PTHR11689:SF88 - CHLORIDE CHANNEL // SUBFAMILY NOT NAMED Genomic Order:  1867
Name:  ? Sobic.004G179300 Secondary Identifier:  ? PAC:37929612
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G179300 0.5kb upstream 0.5kb upstream 9398 true Chr04: 53215124-53224521 Sorghum bicolor
Sobic.004G179300 0.5kb upstream 0.5kb upstream 500 false Chr04: 53224022-53224521 Sorghum bicolor
Sobic.004G179300 0.5kb downstream 0.5kb downstream 9398 true Chr04: 53214624-53224021 Sorghum bicolor
Sobic.004G179300 0.5kb downstream 0.5kb downstream 500 false Chr04: 53214624-53215123 Sorghum bicolor
Sobic.004G179300 1.0kb upstream 1.0kb upstream 9898 true Chr04: 53215124-53225021 Sorghum bicolor
Sobic.004G179300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 53224022-53225021 Sorghum bicolor
Sobic.004G179300 1.0kb downstream 1.0kb downstream 9898 true Chr04: 53214124-53224021 Sorghum bicolor
Sobic.004G179300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 53214124-53215123 Sorghum bicolor
Sobic.004G179300 2.0kb upstream 2.0kb upstream 10898 true Chr04: 53215124-53226021 Sorghum bicolor
Sobic.004G179300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 53224022-53226021 Sorghum bicolor
Sobic.004G179300 2.0kb downstream 2.0kb downstream 10898 true Chr04: 53213124-53224021 Sorghum bicolor
Sobic.004G179300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 53213124-53215123 Sorghum bicolor
Sobic.004G179300 5.0kb upstream 5.0kb upstream 13898 true Chr04: 53215124-53229021 Sorghum bicolor
Sobic.004G179300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 53224022-53229021 Sorghum bicolor
Sobic.004G179300 5.0kb downstream 5.0kb downstream 13898 true Chr04: 53210124-53224021 Sorghum bicolor
Sobic.004G179300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 53210124-53215123 Sorghum bicolor
Sobic.004G179300 10.0kb upstream 10.0kb upstream 18898 true Chr04: 53215124-53234021 Sorghum bicolor
Sobic.004G179300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 53224022-53234021 Sorghum bicolor
Sobic.004G179300 10.0kb downstream 10.0kb downstream 18898 true Chr04: 53205124-53224021 Sorghum bicolor
Sobic.004G179300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 53205124-53215123 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190802 5267 Panicoideae View MSA
124579761 5269 Grass View MSA
122047226 5273 Angiosperm View MSA
121350154 5274 Embryophyte View MSA
123428433 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.906       Low
cufflinks 13.155     High  
cufflinks 22.519     High  
cufflinks 13.39     High  
cufflinks 11.722        
cufflinks 10.627        
cufflinks 13.114     High  
cufflinks 10.342     High  
cufflinks 8.165        
cufflinks 9.791        
cufflinks 21.195     High  
cufflinks 35.711     High High
cufflinks 7.347       Low
cufflinks 35.817     High High
cufflinks 9.891        
cufflinks 27.546     High  
cufflinks 12.238     High  
cufflinks 13.402     High  
cufflinks 18.508     High  
cufflinks 15.051     High  
cufflinks 5.775       Low
cufflinks 32.137     High High
cufflinks 31.702     High High
cufflinks 31.175     High High
cufflinks 15.584     High  
cufflinks 10.382     High  
cufflinks 12.478     High  
cufflinks 4.467       Low
cufflinks 13.602     High  
cufflinks 10.787        

0 Strain