Gene : Sobic.004G167000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR33083:SF5 - POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN Genomic Order:  1740
Name:  ? Sobic.004G167000 Secondary Identifier:  ? PAC:37930381
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G167000 0.5kb upstream 0.5kb upstream 1510 true Chr04: 51715803-51717312 Sorghum bicolor
Sobic.004G167000 0.5kb upstream 0.5kb upstream 500 false Chr04: 51715803-51716302 Sorghum bicolor
Sobic.004G167000 0.5kb downstream 0.5kb downstream 1510 true Chr04: 51716303-51717812 Sorghum bicolor
Sobic.004G167000 0.5kb downstream 0.5kb downstream 500 false Chr04: 51717313-51717812 Sorghum bicolor
Sobic.004G167000 1.0kb upstream 1.0kb upstream 2010 true Chr04: 51715303-51717312 Sorghum bicolor
Sobic.004G167000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 51715303-51716302 Sorghum bicolor
Sobic.004G167000 1.0kb downstream 1.0kb downstream 2010 true Chr04: 51716303-51718312 Sorghum bicolor
Sobic.004G167000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 51717313-51718312 Sorghum bicolor
Sobic.004G167000 2.0kb upstream 2.0kb upstream 3010 true Chr04: 51714303-51717312 Sorghum bicolor
Sobic.004G167000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 51714303-51716302 Sorghum bicolor
Sobic.004G167000 2.0kb downstream 2.0kb downstream 3010 true Chr04: 51716303-51719312 Sorghum bicolor
Sobic.004G167000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 51717313-51719312 Sorghum bicolor
Sobic.004G167000 5.0kb upstream 5.0kb upstream 6010 true Chr04: 51711303-51717312 Sorghum bicolor
Sobic.004G167000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 51711303-51716302 Sorghum bicolor
Sobic.004G167000 5.0kb downstream 5.0kb downstream 6010 true Chr04: 51716303-51722312 Sorghum bicolor
Sobic.004G167000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 51717313-51722312 Sorghum bicolor
Sobic.004G167000 10.0kb upstream 10.0kb upstream 11010 true Chr04: 51706303-51717312 Sorghum bicolor
Sobic.004G167000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 51706303-51716302 Sorghum bicolor
Sobic.004G167000 10.0kb downstream 10.0kb downstream 11010 true Chr04: 51716303-51727312 Sorghum bicolor
Sobic.004G167000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 51717313-51727312 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184598 5267 Panicoideae View MSA
124583224 5269 Grass View MSA
122047516 5273 Angiosperm View MSA
121310750 5274 Embryophyte View MSA
123348161 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.115        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.097        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.521       High
cufflinks 0.079        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low  
cufflinks 0.018     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.056     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.675       High
cufflinks 0.567       High
cufflinks 0.026     Low  
cufflinks 0.497       High
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.281       High
cufflinks 0.052     Low  

0 Strain