Gene : Sobic.009G074400 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11909//PTHR11909:SF73 - CASEIN KINASE-RELATED // PROTEIN KINASE FAMILY PROTEIN Genomic Order:  774
Name:  ? Sobic.009G074400 Secondary Identifier:  ? PAC:37921967
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G074400 0.5kb upstream 0.5kb upstream 10480 true Chr09: 9401388-9411867 Sorghum bicolor
Sobic.009G074400 0.5kb upstream 0.5kb upstream 500 false Chr09: 9411368-9411867 Sorghum bicolor
Sobic.009G074400 0.5kb downstream 0.5kb downstream 10480 true Chr09: 9400888-9411367 Sorghum bicolor
Sobic.009G074400 0.5kb downstream 0.5kb downstream 500 false Chr09: 9400888-9401387 Sorghum bicolor
Sobic.009G074400 1.0kb upstream 1.0kb upstream 10980 true Chr09: 9401388-9412367 Sorghum bicolor
Sobic.009G074400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 9411368-9412367 Sorghum bicolor
Sobic.009G074400 1.0kb downstream 1.0kb downstream 10980 true Chr09: 9400388-9411367 Sorghum bicolor
Sobic.009G074400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 9400388-9401387 Sorghum bicolor
Sobic.009G074400 2.0kb upstream 2.0kb upstream 11980 true Chr09: 9401388-9413367 Sorghum bicolor
Sobic.009G074400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 9411368-9413367 Sorghum bicolor
Sobic.009G074400 2.0kb downstream 2.0kb downstream 11980 true Chr09: 9399388-9411367 Sorghum bicolor
Sobic.009G074400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 9399388-9401387 Sorghum bicolor
Sobic.009G074400 5.0kb upstream 5.0kb upstream 14980 true Chr09: 9401388-9416367 Sorghum bicolor
Sobic.009G074400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 9411368-9416367 Sorghum bicolor
Sobic.009G074400 5.0kb downstream 5.0kb downstream 14980 true Chr09: 9396388-9411367 Sorghum bicolor
Sobic.009G074400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 9396388-9401387 Sorghum bicolor
Sobic.009G074400 10.0kb upstream 10.0kb upstream 19980 true Chr09: 9401388-9421367 Sorghum bicolor
Sobic.009G074400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 9411368-9421367 Sorghum bicolor
Sobic.009G074400 10.0kb downstream 10.0kb downstream 19980 true Chr09: 9391388-9411367 Sorghum bicolor
Sobic.009G074400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 9391388-9401387 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182070 5267 Panicoideae View MSA
124578925 5269 Grass View MSA
122042474 5273 Angiosperm View MSA
121348190 5274 Embryophyte View MSA
123427857 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.72       Low
cufflinks 3.28       Low
cufflinks 5.247        
cufflinks 8.892       High
cufflinks 6.75        
cufflinks 3.762       Low
cufflinks 6.002        
cufflinks 4.509        
cufflinks 12.195       High
cufflinks 12.236     High High
cufflinks 4.982        
cufflinks 7.22        
cufflinks 6.229        
cufflinks 5.042        
cufflinks 5.569        
cufflinks 4.734        
cufflinks 6.804        
cufflinks 6.271        
cufflinks 4.973        
cufflinks 10.331       High
cufflinks 9.039       High
cufflinks 4.984        
cufflinks 5.921        
cufflinks 5.654        
cufflinks 9.019     High High
cufflinks 5.029        
cufflinks 6.236        
cufflinks 4.252        
cufflinks 3.923        
cufflinks 5.928        

0 Strain