Gene : Sobic.004G164000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31311:SF4 - GLYCOSYLTRANSFERASE 3-RELATED Genomic Order:  1710
Name:  ? Sobic.004G164000 Secondary Identifier:  ? PAC:37934059
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-5936 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G164000 0.5kb upstream 0.5kb upstream 5816 true Chr04: 51341441-51347256 Sorghum bicolor
Sobic.004G164000 0.5kb upstream 0.5kb upstream 500 false Chr04: 51346757-51347256 Sorghum bicolor
Sobic.004G164000 0.5kb downstream 0.5kb downstream 5816 true Chr04: 51340941-51346756 Sorghum bicolor
Sobic.004G164000 0.5kb downstream 0.5kb downstream 500 false Chr04: 51340941-51341440 Sorghum bicolor
Sobic.004G164000 1.0kb upstream 1.0kb upstream 6316 true Chr04: 51341441-51347756 Sorghum bicolor
Sobic.004G164000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 51346757-51347756 Sorghum bicolor
Sobic.004G164000 1.0kb downstream 1.0kb downstream 6316 true Chr04: 51340441-51346756 Sorghum bicolor
Sobic.004G164000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 51340441-51341440 Sorghum bicolor
Sobic.004G164000 2.0kb upstream 2.0kb upstream 7316 true Chr04: 51341441-51348756 Sorghum bicolor
Sobic.004G164000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 51346757-51348756 Sorghum bicolor
Sobic.004G164000 2.0kb downstream 2.0kb downstream 7316 true Chr04: 51339441-51346756 Sorghum bicolor
Sobic.004G164000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 51339441-51341440 Sorghum bicolor
Sobic.004G164000 5.0kb upstream 5.0kb upstream 10316 true Chr04: 51341441-51351756 Sorghum bicolor
Sobic.004G164000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 51346757-51351756 Sorghum bicolor
Sobic.004G164000 5.0kb downstream 5.0kb downstream 10316 true Chr04: 51336441-51346756 Sorghum bicolor
Sobic.004G164000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 51336441-51341440 Sorghum bicolor
Sobic.004G164000 10.0kb upstream 10.0kb upstream 15316 true Chr04: 51341441-51356756 Sorghum bicolor
Sobic.004G164000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 51346757-51356756 Sorghum bicolor
Sobic.004G164000 10.0kb downstream 10.0kb downstream 15316 true Chr04: 51331441-51346756 Sorghum bicolor
Sobic.004G164000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 51331441-51341440 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188249 5267 Panicoideae View MSA
124583010 5269 Grass View MSA
122047290 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.569     High High
cufflinks 3.797       Low
cufflinks 5.579        
cufflinks 6.144        
cufflinks 10.669        
cufflinks 7.686        
cufflinks 5.724        
cufflinks 4.697       Low
cufflinks 7.733        
cufflinks 6.345        
cufflinks 9.494        
cufflinks 9.528        
cufflinks 7.895        
cufflinks 11.946     High High
cufflinks 8.631        
cufflinks 5.201       Low
cufflinks 5.766        
cufflinks 5.555        
cufflinks 9.787        
cufflinks 6.362        
cufflinks 6.384        
cufflinks 13.854     High High
cufflinks 10.917        
cufflinks 10.966        
cufflinks 8.748     High  
cufflinks 4.565       Low
cufflinks 6.282        
cufflinks 3.016       Low
cufflinks 5.9        
cufflinks 7.934        

0 Strain