Gene : Sobic.004G157600 S. bicolor v3.1.1
Defline:  (1 of 1) PF12452 - Protein of unknown function (DUF3685) (DUF3685) Genomic Order:  1641
Name:  ? Sobic.004G157600 Secondary Identifier:  ? PAC:37928912
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G157600 0.5kb upstream 0.5kb upstream 5542 true Chr04: 49980070-49985611 Sorghum bicolor
Sobic.004G157600 0.5kb upstream 0.5kb upstream 500 false Chr04: 49980070-49980569 Sorghum bicolor
Sobic.004G157600 0.5kb downstream 0.5kb downstream 5542 true Chr04: 49980570-49986111 Sorghum bicolor
Sobic.004G157600 0.5kb downstream 0.5kb downstream 500 false Chr04: 49985612-49986111 Sorghum bicolor
Sobic.004G157600 1.0kb upstream 1.0kb upstream 6042 true Chr04: 49979570-49985611 Sorghum bicolor
Sobic.004G157600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 49979570-49980569 Sorghum bicolor
Sobic.004G157600 1.0kb downstream 1.0kb downstream 6042 true Chr04: 49980570-49986611 Sorghum bicolor
Sobic.004G157600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 49985612-49986611 Sorghum bicolor
Sobic.004G157600 2.0kb upstream 2.0kb upstream 7042 true Chr04: 49978570-49985611 Sorghum bicolor
Sobic.004G157600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 49978570-49980569 Sorghum bicolor
Sobic.004G157600 2.0kb downstream 2.0kb downstream 7042 true Chr04: 49980570-49987611 Sorghum bicolor
Sobic.004G157600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 49985612-49987611 Sorghum bicolor
Sobic.004G157600 5.0kb upstream 5.0kb upstream 10042 true Chr04: 49975570-49985611 Sorghum bicolor
Sobic.004G157600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 49975570-49980569 Sorghum bicolor
Sobic.004G157600 5.0kb downstream 5.0kb downstream 10042 true Chr04: 49980570-49990611 Sorghum bicolor
Sobic.004G157600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 49985612-49990611 Sorghum bicolor
Sobic.004G157600 10.0kb upstream 10.0kb upstream 15042 true Chr04: 49970570-49985611 Sorghum bicolor
Sobic.004G157600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 49970570-49980569 Sorghum bicolor
Sobic.004G157600 10.0kb downstream 10.0kb downstream 15042 true Chr04: 49980570-49995611 Sorghum bicolor
Sobic.004G157600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 49985612-49995611 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179952 5267 Panicoideae View MSA
124578976 5269 Grass View MSA
122046788 5273 Angiosperm View MSA
121346077 5274 Embryophyte View MSA
123380322 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.882        
cufflinks 2.323       Low
cufflinks 8.577        
cufflinks 6.321        
cufflinks 11.931       High
cufflinks 8.228        
cufflinks 9.921        
cufflinks 6.398        
cufflinks 5.756        
cufflinks 6.378        
cufflinks 6.367        
cufflinks 7.216        
cufflinks 6.841        
cufflinks 5.008        
cufflinks 7.494        
cufflinks 8.091        
cufflinks 10.193        
cufflinks 12.827     High High
cufflinks 7.037        
cufflinks 10.452        
cufflinks 24.011     High High
cufflinks 5.706        
cufflinks 5.673        
cufflinks 5.988        
cufflinks 4.562        
cufflinks 2.607       Low
cufflinks 5.839        
cufflinks 0.544       Low
cufflinks 15.188     High High
cufflinks 8.223        

0 Strain