Gene : Sobic.004G207300 S. bicolor v3.1.1
Defline:  (1 of 103) PF00226 - DnaJ domain (DnaJ) Genomic Order:  2156
Name:  ? Sobic.004G207300 Secondary Identifier:  ? PAC:37929520
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G207300 0.5kb upstream 0.5kb upstream 1856 true Chr04: 55768266-55770121 Sorghum bicolor
Sobic.004G207300 0.5kb upstream 0.5kb upstream 500 false Chr04: 55768266-55768765 Sorghum bicolor
Sobic.004G207300 0.5kb downstream 0.5kb downstream 1856 true Chr04: 55768766-55770621 Sorghum bicolor
Sobic.004G207300 0.5kb downstream 0.5kb downstream 500 false Chr04: 55770122-55770621 Sorghum bicolor
Sobic.004G207300 1.0kb upstream 1.0kb upstream 2356 true Chr04: 55767766-55770121 Sorghum bicolor
Sobic.004G207300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 55767766-55768765 Sorghum bicolor
Sobic.004G207300 1.0kb downstream 1.0kb downstream 2356 true Chr04: 55768766-55771121 Sorghum bicolor
Sobic.004G207300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 55770122-55771121 Sorghum bicolor
Sobic.004G207300 2.0kb upstream 2.0kb upstream 3356 true Chr04: 55766766-55770121 Sorghum bicolor
Sobic.004G207300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 55766766-55768765 Sorghum bicolor
Sobic.004G207300 2.0kb downstream 2.0kb downstream 3356 true Chr04: 55768766-55772121 Sorghum bicolor
Sobic.004G207300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 55770122-55772121 Sorghum bicolor
Sobic.004G207300 5.0kb upstream 5.0kb upstream 6356 true Chr04: 55763766-55770121 Sorghum bicolor
Sobic.004G207300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 55763766-55768765 Sorghum bicolor
Sobic.004G207300 5.0kb downstream 5.0kb downstream 6356 true Chr04: 55768766-55775121 Sorghum bicolor
Sobic.004G207300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 55770122-55775121 Sorghum bicolor
Sobic.004G207300 10.0kb upstream 10.0kb upstream 11356 true Chr04: 55758766-55770121 Sorghum bicolor
Sobic.004G207300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 55758766-55768765 Sorghum bicolor
Sobic.004G207300 10.0kb downstream 10.0kb downstream 11356 true Chr04: 55768766-55780121 Sorghum bicolor
Sobic.004G207300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 55770122-55780121 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190332 5267 Panicoideae View MSA
124568929 5269 Grass View MSA
122046957 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121350989 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.29        
cufflinks 0.333        
cufflinks 19.645     High High
cufflinks 19.433     High High
cufflinks 1.415        
cufflinks 10.69       High
cufflinks 0.118       Low
cufflinks 0.767        
cufflinks 0.168        
cufflinks 0.269        
cufflinks 0.727        
cufflinks 0.212        
cufflinks 0.378        
cufflinks 0.326        
cufflinks 5.875       High
cufflinks 2.904        
cufflinks 0.081     Low Low
cufflinks 0.149       Low
cufflinks 3.047        
cufflinks 0.23        
cufflinks 0.249        
cufflinks 10.844       High
cufflinks 0.074     Low Low
cufflinks 0.103       Low
cufflinks 0.736        
cufflinks 1.267        
cufflinks 26.149     High High
cufflinks 0.942        
cufflinks 0.203        
cufflinks 7.606       High

0 Strain