Gene : Sobic.009G049300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22937//PTHR22937:SF59 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  504
Name:  ? Sobic.009G049300 Secondary Identifier:  ? PAC:37922026
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G049300 0.5kb upstream 0.5kb upstream 7051 true Chr09: 4867461-4874511 Sorghum bicolor
Sobic.009G049300 0.5kb upstream 0.5kb upstream 500 false Chr09: 4874012-4874511 Sorghum bicolor
Sobic.009G049300 0.5kb downstream 0.5kb downstream 7051 true Chr09: 4866961-4874011 Sorghum bicolor
Sobic.009G049300 0.5kb downstream 0.5kb downstream 500 false Chr09: 4866961-4867460 Sorghum bicolor
Sobic.009G049300 1.0kb upstream 1.0kb upstream 7551 true Chr09: 4867461-4875011 Sorghum bicolor
Sobic.009G049300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 4874012-4875011 Sorghum bicolor
Sobic.009G049300 1.0kb downstream 1.0kb downstream 7551 true Chr09: 4866461-4874011 Sorghum bicolor
Sobic.009G049300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 4866461-4867460 Sorghum bicolor
Sobic.009G049300 2.0kb upstream 2.0kb upstream 8551 true Chr09: 4867461-4876011 Sorghum bicolor
Sobic.009G049300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 4874012-4876011 Sorghum bicolor
Sobic.009G049300 2.0kb downstream 2.0kb downstream 8551 true Chr09: 4865461-4874011 Sorghum bicolor
Sobic.009G049300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 4865461-4867460 Sorghum bicolor
Sobic.009G049300 5.0kb upstream 5.0kb upstream 11551 true Chr09: 4867461-4879011 Sorghum bicolor
Sobic.009G049300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 4874012-4879011 Sorghum bicolor
Sobic.009G049300 5.0kb downstream 5.0kb downstream 11551 true Chr09: 4862461-4874011 Sorghum bicolor
Sobic.009G049300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 4862461-4867460 Sorghum bicolor
Sobic.009G049300 10.0kb upstream 10.0kb upstream 16551 true Chr09: 4867461-4884011 Sorghum bicolor
Sobic.009G049300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 4874012-4884011 Sorghum bicolor
Sobic.009G049300 10.0kb downstream 10.0kb downstream 16551 true Chr09: 4857461-4874011 Sorghum bicolor
Sobic.009G049300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 4857461-4867460 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180322 5267 Panicoideae View MSA
124588328 5269 Grass View MSA
122049263 5273 Angiosperm View MSA
121311321 5274 Embryophyte View MSA
123348631 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.504     High High
cufflinks 16.89     High High
cufflinks 10.16     High  
cufflinks 8.145        
cufflinks 5.289       Low
cufflinks 13.556     High High
cufflinks 10.888        
cufflinks 10.134     High  
cufflinks 10.522        
cufflinks 10.562        
cufflinks 7.396        
cufflinks 8.722        
cufflinks 8.809        
cufflinks 8.649        
cufflinks 9.696        
cufflinks 22.569     High High
cufflinks 10.499        
cufflinks 11.232        
cufflinks 16.042     High High
cufflinks 9.62        
cufflinks 8.464        
cufflinks 8.069        
cufflinks 8.554        
cufflinks 8.097        
cufflinks 15.11     High High
cufflinks 14.188     High High
cufflinks 6.772       Low
cufflinks 23.484     High High
cufflinks 9.633        
cufflinks 7.163        

0 Strain