Gene : Sobic.009G052200 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR22912//PTHR22912:SF165 - DISULFIDE OXIDOREDUCTASE // DIHYDROLIPOYL DEHYDROGENASE 1, CHLOROPLASTIC-RELATED Genomic Order:  534
Name:  ? Sobic.009G052200 Secondary Identifier:  ? PAC:37922326
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Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor GLYCLEAV-PWY Sorghum bicolor pathologic  
Sbicolor PWY-5046 Sorghum bicolor pathologic  
Sbicolor PWY-5084 Sorghum bicolor pathologic  
Sbicolor PWY-5173 Sorghum bicolor pathologic  
Sbicolor PWY-5464 Sorghum bicolor pathologic  
Sbicolor PYRUVDEHYD-PWY Sorghum bicolor pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G052200 0.5kb upstream 0.5kb upstream 7040 true Chr09: 5297612-5304651 Sorghum bicolor
Sobic.009G052200 0.5kb upstream 0.5kb upstream 500 false Chr09: 5304152-5304651 Sorghum bicolor
Sobic.009G052200 0.5kb downstream 0.5kb downstream 7040 true Chr09: 5297112-5304151 Sorghum bicolor
Sobic.009G052200 0.5kb downstream 0.5kb downstream 500 false Chr09: 5297112-5297611 Sorghum bicolor
Sobic.009G052200 1.0kb upstream 1.0kb upstream 7540 true Chr09: 5297612-5305151 Sorghum bicolor
Sobic.009G052200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 5304152-5305151 Sorghum bicolor
Sobic.009G052200 1.0kb downstream 1.0kb downstream 7540 true Chr09: 5296612-5304151 Sorghum bicolor
Sobic.009G052200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 5296612-5297611 Sorghum bicolor
Sobic.009G052200 2.0kb upstream 2.0kb upstream 8540 true Chr09: 5297612-5306151 Sorghum bicolor
Sobic.009G052200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 5304152-5306151 Sorghum bicolor
Sobic.009G052200 2.0kb downstream 2.0kb downstream 8540 true Chr09: 5295612-5304151 Sorghum bicolor
Sobic.009G052200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 5295612-5297611 Sorghum bicolor
Sobic.009G052200 5.0kb upstream 5.0kb upstream 11540 true Chr09: 5297612-5309151 Sorghum bicolor
Sobic.009G052200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 5304152-5309151 Sorghum bicolor
Sobic.009G052200 5.0kb downstream 5.0kb downstream 11540 true Chr09: 5292612-5304151 Sorghum bicolor
Sobic.009G052200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 5292612-5297611 Sorghum bicolor
Sobic.009G052200 10.0kb upstream 10.0kb upstream 16540 true Chr09: 5297612-5314151 Sorghum bicolor
Sobic.009G052200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 5304152-5314151 Sorghum bicolor
Sobic.009G052200 10.0kb downstream 10.0kb downstream 16540 true Chr09: 5287612-5304151 Sorghum bicolor
Sobic.009G052200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 5287612-5297611 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041061 5273 Angiosperm View MSA
122185495 5267 Panicoideae View MSA
124582173 5269 Grass View MSA
121346469 5274 Embryophyte View MSA
123424550 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.679        
cufflinks 0.657       Low
cufflinks 3.283        
cufflinks 7.099        
cufflinks 8.887        
cufflinks 4.477        
cufflinks 9.818        
cufflinks 2.17       Low
cufflinks 4.954        
cufflinks 6.171        
cufflinks 21.17     High  
cufflinks 18.822     High  
cufflinks 4.707        
cufflinks 16.229     High  
cufflinks 5.086        
cufflinks 1.875       Low
cufflinks 11.22        
cufflinks 11.83     High  
cufflinks 2.526        
cufflinks 8.761        
cufflinks 10.431        
cufflinks 34.613     High High
cufflinks 26.127     High High
cufflinks 25.191     High High
cufflinks 0.943       Low
cufflinks 0.39       Low
cufflinks 32.527     High High
cufflinks 0.687       Low
cufflinks 9.019        
cufflinks 9.951        

0 Strain