Gene : Sobic.009G131600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13068//PTHR13068:SF24 - CGI-12 PROTEIN-RELATED // MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR-LIKE PROTEIN BELAYA SMERT Genomic Order:  1356
Name:  ? Sobic.009G131600 Secondary Identifier:  ? PAC:37919390
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G131600 0.5kb upstream 0.5kb upstream 7588 true Chr09: 48524091-48531678 Sorghum bicolor
Sobic.009G131600 0.5kb upstream 0.5kb upstream 500 false Chr09: 48524091-48524590 Sorghum bicolor
Sobic.009G131600 0.5kb downstream 0.5kb downstream 7588 true Chr09: 48524591-48532178 Sorghum bicolor
Sobic.009G131600 0.5kb downstream 0.5kb downstream 500 false Chr09: 48531679-48532178 Sorghum bicolor
Sobic.009G131600 1.0kb upstream 1.0kb upstream 8088 true Chr09: 48523591-48531678 Sorghum bicolor
Sobic.009G131600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 48523591-48524590 Sorghum bicolor
Sobic.009G131600 1.0kb downstream 1.0kb downstream 8088 true Chr09: 48524591-48532678 Sorghum bicolor
Sobic.009G131600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 48531679-48532678 Sorghum bicolor
Sobic.009G131600 2.0kb upstream 2.0kb upstream 9088 true Chr09: 48522591-48531678 Sorghum bicolor
Sobic.009G131600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 48522591-48524590 Sorghum bicolor
Sobic.009G131600 2.0kb downstream 2.0kb downstream 9088 true Chr09: 48524591-48533678 Sorghum bicolor
Sobic.009G131600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 48531679-48533678 Sorghum bicolor
Sobic.009G131600 5.0kb upstream 5.0kb upstream 12088 true Chr09: 48519591-48531678 Sorghum bicolor
Sobic.009G131600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 48519591-48524590 Sorghum bicolor
Sobic.009G131600 5.0kb downstream 5.0kb downstream 12088 true Chr09: 48524591-48536678 Sorghum bicolor
Sobic.009G131600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 48531679-48536678 Sorghum bicolor
Sobic.009G131600 10.0kb upstream 10.0kb upstream 17088 true Chr09: 48514591-48531678 Sorghum bicolor
Sobic.009G131600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 48514591-48524590 Sorghum bicolor
Sobic.009G131600 10.0kb downstream 10.0kb downstream 17088 true Chr09: 48524591-48541678 Sorghum bicolor
Sobic.009G131600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 48531679-48541678 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040971 5273 Angiosperm View MSA
122175099 5267 Panicoideae View MSA
124580695 5269 Grass View MSA
121347791 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.207       High
cufflinks 0.516       Low
cufflinks 1.056        
cufflinks 1.614       High
cufflinks 1.35        
cufflinks 0.902        
cufflinks 1.388        
cufflinks 1.238        
cufflinks 1.263        
cufflinks 1.217        
cufflinks 0.674        
cufflinks 0.888        
cufflinks 0.687        
cufflinks 0.729        
cufflinks 0.848        
cufflinks 1.031        
cufflinks 1.43        
cufflinks 1.875       High
cufflinks 0.726        
cufflinks 1.676       High
cufflinks 2.195       High
cufflinks 0.569       Low
cufflinks 0.792        
cufflinks 0.855        
cufflinks 0.666        
cufflinks 0.634       Low
cufflinks 0.842        
cufflinks 1.028        
cufflinks 3.883       High
cufflinks 1.292        

0 Strain