Gene : Sobic.009G135400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22763//PTHR22763:SF80 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1392
Name:  ? Sobic.009G135400 Secondary Identifier:  ? PAC:37922395
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G135400 0.5kb upstream 0.5kb upstream 1376 true Chr09: 49053429-49054804 Sorghum bicolor
Sobic.009G135400 0.5kb upstream 0.5kb upstream 500 false Chr09: 49054305-49054804 Sorghum bicolor
Sobic.009G135400 0.5kb downstream 0.5kb downstream 1376 true Chr09: 49052929-49054304 Sorghum bicolor
Sobic.009G135400 0.5kb downstream 0.5kb downstream 500 false Chr09: 49052929-49053428 Sorghum bicolor
Sobic.009G135400 1.0kb upstream 1.0kb upstream 1876 true Chr09: 49053429-49055304 Sorghum bicolor
Sobic.009G135400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 49054305-49055304 Sorghum bicolor
Sobic.009G135400 1.0kb downstream 1.0kb downstream 1876 true Chr09: 49052429-49054304 Sorghum bicolor
Sobic.009G135400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 49052429-49053428 Sorghum bicolor
Sobic.009G135400 2.0kb upstream 2.0kb upstream 2876 true Chr09: 49053429-49056304 Sorghum bicolor
Sobic.009G135400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 49054305-49056304 Sorghum bicolor
Sobic.009G135400 2.0kb downstream 2.0kb downstream 2876 true Chr09: 49051429-49054304 Sorghum bicolor
Sobic.009G135400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 49051429-49053428 Sorghum bicolor
Sobic.009G135400 5.0kb upstream 5.0kb upstream 5876 true Chr09: 49053429-49059304 Sorghum bicolor
Sobic.009G135400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 49054305-49059304 Sorghum bicolor
Sobic.009G135400 5.0kb downstream 5.0kb downstream 5876 true Chr09: 49048429-49054304 Sorghum bicolor
Sobic.009G135400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 49048429-49053428 Sorghum bicolor
Sobic.009G135400 10.0kb upstream 10.0kb upstream 10876 true Chr09: 49053429-49064304 Sorghum bicolor
Sobic.009G135400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 49054305-49064304 Sorghum bicolor
Sobic.009G135400 10.0kb downstream 10.0kb downstream 10876 true Chr09: 49043429-49054304 Sorghum bicolor
Sobic.009G135400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 49043429-49053428 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195292 5267 Panicoideae View MSA
124572256 5269 Grass View MSA
122041904 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121309901 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.177       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.072     Low  
cufflinks 0.385       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.043     Low  
cufflinks 0.038     Low  
cufflinks 0.014     Low Low
cufflinks 0.019     Low Low
cufflinks 0.072     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.042     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low  
cufflinks 0.024     Low  
cufflinks 0.026     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.088     Low  
cufflinks 0.054     Low  
cufflinks 0.029     Low  
cufflinks 0.043     Low  
cufflinks 0.016     Low Low
cufflinks 0.046        
cufflinks 0.018     Low Low
cufflinks 0.077        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low Low

0 Strain