Gene : Sobic.009G143100 S. bicolor v3.1.1
Defline:  (1 of 1) K02636 - cytochrome b6-f complex iron-sulfur subunit (petC) Genomic Order:  1467
Name:  ? Sobic.009G143100 Secondary Identifier:  ? PAC:37920841
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PHOTOALL-PWY Sorghum bicolor pathologic  
Sbicolor PWY-101 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G143100 0.5kb upstream 0.5kb upstream 2268 true Chr09: 50039522-50041789 Sorghum bicolor
Sobic.009G143100 0.5kb upstream 0.5kb upstream 500 false Chr09: 50041290-50041789 Sorghum bicolor
Sobic.009G143100 0.5kb downstream 0.5kb downstream 2268 true Chr09: 50039022-50041289 Sorghum bicolor
Sobic.009G143100 0.5kb downstream 0.5kb downstream 500 false Chr09: 50039022-50039521 Sorghum bicolor
Sobic.009G143100 1.0kb upstream 1.0kb upstream 2768 true Chr09: 50039522-50042289 Sorghum bicolor
Sobic.009G143100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 50041290-50042289 Sorghum bicolor
Sobic.009G143100 1.0kb downstream 1.0kb downstream 2768 true Chr09: 50038522-50041289 Sorghum bicolor
Sobic.009G143100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 50038522-50039521 Sorghum bicolor
Sobic.009G143100 2.0kb upstream 2.0kb upstream 3768 true Chr09: 50039522-50043289 Sorghum bicolor
Sobic.009G143100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 50041290-50043289 Sorghum bicolor
Sobic.009G143100 2.0kb downstream 2.0kb downstream 3768 true Chr09: 50037522-50041289 Sorghum bicolor
Sobic.009G143100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 50037522-50039521 Sorghum bicolor
Sobic.009G143100 5.0kb upstream 5.0kb upstream 6768 true Chr09: 50039522-50046289 Sorghum bicolor
Sobic.009G143100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 50041290-50046289 Sorghum bicolor
Sobic.009G143100 5.0kb downstream 5.0kb downstream 6768 true Chr09: 50034522-50041289 Sorghum bicolor
Sobic.009G143100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 50034522-50039521 Sorghum bicolor
Sobic.009G143100 10.0kb upstream 10.0kb upstream 11768 true Chr09: 50039522-50051289 Sorghum bicolor
Sobic.009G143100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 50041290-50051289 Sorghum bicolor
Sobic.009G143100 10.0kb downstream 10.0kb downstream 11768 true Chr09: 50029522-50041289 Sorghum bicolor
Sobic.009G143100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 50029522-50039521 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179581 5267 Panicoideae View MSA
124569443 5269 Grass View MSA
122045987 5273 Angiosperm View MSA
121343796 5274 Embryophyte View MSA
123424591 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.789        
cufflinks 1898.274     High High
cufflinks 468.886     High High
cufflinks 215.774     High  
cufflinks 8.883        
cufflinks 183.73     High  
cufflinks 553.878     High High
cufflinks 1064.0     High High
cufflinks 8.801        
cufflinks 7.102        
cufflinks 0.56       Low
cufflinks 0.459       Low
cufflinks 7.926        
cufflinks 0.434       Low
cufflinks 67.725     High  
cufflinks 982.229     High High
cufflinks 461.117     High High
cufflinks 487.048     High High
cufflinks 524.349     High High
cufflinks 265.86     High  
cufflinks 3.708        
cufflinks 0.391       Low
cufflinks 0.191       Low
cufflinks 0.775       Low
cufflinks 731.114     High High
cufflinks 1499.284     High High
cufflinks 0.307       Low
cufflinks 0.935       Low
cufflinks 292.412     High  
cufflinks 56.415     High  

0 Strain