Gene : Sobic.004G222700 S. bicolor v3.1.1
Defline:  (1 of 6) PF05757 - Oxygen evolving enhancer protein 3 (PsbQ) (PsbQ) Genomic Order:  2320
Name:  ? Sobic.004G222700 Secondary Identifier:  ? PAC:37932825
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G222700 0.5kb upstream 0.5kb upstream 4750 true Chr04: 57301621-57306370 Sorghum bicolor
Sobic.004G222700 0.5kb upstream 0.5kb upstream 500 false Chr04: 57301621-57302120 Sorghum bicolor
Sobic.004G222700 0.5kb downstream 0.5kb downstream 4750 true Chr04: 57302121-57306870 Sorghum bicolor
Sobic.004G222700 0.5kb downstream 0.5kb downstream 500 false Chr04: 57306371-57306870 Sorghum bicolor
Sobic.004G222700 1.0kb upstream 1.0kb upstream 5250 true Chr04: 57301121-57306370 Sorghum bicolor
Sobic.004G222700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 57301121-57302120 Sorghum bicolor
Sobic.004G222700 1.0kb downstream 1.0kb downstream 5250 true Chr04: 57302121-57307370 Sorghum bicolor
Sobic.004G222700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 57306371-57307370 Sorghum bicolor
Sobic.004G222700 2.0kb upstream 2.0kb upstream 6250 true Chr04: 57300121-57306370 Sorghum bicolor
Sobic.004G222700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 57300121-57302120 Sorghum bicolor
Sobic.004G222700 2.0kb downstream 2.0kb downstream 6250 true Chr04: 57302121-57308370 Sorghum bicolor
Sobic.004G222700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 57306371-57308370 Sorghum bicolor
Sobic.004G222700 5.0kb upstream 5.0kb upstream 9250 true Chr04: 57297121-57306370 Sorghum bicolor
Sobic.004G222700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 57297121-57302120 Sorghum bicolor
Sobic.004G222700 5.0kb downstream 5.0kb downstream 9250 true Chr04: 57302121-57311370 Sorghum bicolor
Sobic.004G222700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 57306371-57311370 Sorghum bicolor
Sobic.004G222700 10.0kb upstream 10.0kb upstream 14250 true Chr04: 57292121-57306370 Sorghum bicolor
Sobic.004G222700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 57292121-57302120 Sorghum bicolor
Sobic.004G222700 10.0kb downstream 10.0kb downstream 14250 true Chr04: 57302121-57316370 Sorghum bicolor
Sobic.004G222700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 57306371-57316370 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191196 5267 Panicoideae View MSA
124588669 5269 Grass View MSA
122049386 5273 Angiosperm View MSA
121311379 5274 Embryophyte View MSA
123348684 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.208       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low  
cufflinks 0.043     Low  
cufflinks 0.03     Low  
cufflinks 0.077     Low  
cufflinks 0.022     Low  
cufflinks 0.01     Low  
cufflinks 0.042     Low  
cufflinks 0.027     Low  
cufflinks 0.043     Low  
cufflinks 0.076     Low  
cufflinks 0.03     Low  
cufflinks 0.059     Low  
cufflinks 0.178       High
cufflinks 0.025     Low  
cufflinks 0.006     Low Low
cufflinks 0.023     Low  
cufflinks 0.02     Low  
cufflinks 0.046     Low  
cufflinks 0.02     Low  
cufflinks 0.029     Low  
cufflinks 0.074     Low  
cufflinks 0.076     Low  
cufflinks 0.006     Low Low
cufflinks 0.001     Low Low
cufflinks 0.125       High
cufflinks 2.279       High
cufflinks 0.007     Low Low
cufflinks 0.077     Low  

0 Strain