Gene : Sobic.009G148200 S. bicolor v3.1.1
Defline:  (1 of 3) 2.7.1.74 - Deoxycytidine kinase Genomic Order:  1516
Name:  ? Sobic.009G148200 Secondary Identifier:  ? PAC:37919586
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-7199 Sorghum bicolor pathologic  
Sbicolor PWY-7200 Sorghum bicolor pathologic  
Sbicolor PWY-7224 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G148200 0.5kb upstream 0.5kb upstream 5912 true Chr09: 50536075-50541986 Sorghum bicolor
Sobic.009G148200 0.5kb upstream 0.5kb upstream 500 false Chr09: 50536075-50536574 Sorghum bicolor
Sobic.009G148200 0.5kb downstream 0.5kb downstream 5912 true Chr09: 50536575-50542486 Sorghum bicolor
Sobic.009G148200 0.5kb downstream 0.5kb downstream 500 false Chr09: 50541987-50542486 Sorghum bicolor
Sobic.009G148200 1.0kb upstream 1.0kb upstream 6412 true Chr09: 50535575-50541986 Sorghum bicolor
Sobic.009G148200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 50535575-50536574 Sorghum bicolor
Sobic.009G148200 1.0kb downstream 1.0kb downstream 6412 true Chr09: 50536575-50542986 Sorghum bicolor
Sobic.009G148200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 50541987-50542986 Sorghum bicolor
Sobic.009G148200 2.0kb upstream 2.0kb upstream 7412 true Chr09: 50534575-50541986 Sorghum bicolor
Sobic.009G148200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 50534575-50536574 Sorghum bicolor
Sobic.009G148200 2.0kb downstream 2.0kb downstream 7412 true Chr09: 50536575-50543986 Sorghum bicolor
Sobic.009G148200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 50541987-50543986 Sorghum bicolor
Sobic.009G148200 5.0kb upstream 5.0kb upstream 10412 true Chr09: 50531575-50541986 Sorghum bicolor
Sobic.009G148200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 50531575-50536574 Sorghum bicolor
Sobic.009G148200 5.0kb downstream 5.0kb downstream 10412 true Chr09: 50536575-50546986 Sorghum bicolor
Sobic.009G148200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 50541987-50546986 Sorghum bicolor
Sobic.009G148200 10.0kb upstream 10.0kb upstream 15412 true Chr09: 50526575-50541986 Sorghum bicolor
Sobic.009G148200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 50526575-50536574 Sorghum bicolor
Sobic.009G148200 10.0kb downstream 10.0kb downstream 15412 true Chr09: 50536575-50551986 Sorghum bicolor
Sobic.009G148200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 50541987-50551986 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188232 5267 Panicoideae View MSA
124578778 5269 Grass View MSA
122044312 5273 Angiosperm View MSA
121349442 5274 Embryophyte View MSA
123425271 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.11     High  
cufflinks 0.114       Low
cufflinks 0.579       Low
cufflinks 2.006        
cufflinks 14.656     High High
cufflinks 2.156        
cufflinks 6.729        
cufflinks 0.815       Low
cufflinks 4.168        
cufflinks 4.594        
cufflinks 4.163        
cufflinks 4.246        
cufflinks 3.337        
cufflinks 3.856        
cufflinks 5.268        
cufflinks 0.438       Low
cufflinks 7.245        
cufflinks 7.966        
cufflinks 0.567       Low
cufflinks 5.761        
cufflinks 32.175     High High
cufflinks 4.241        
cufflinks 4.141        
cufflinks 4.762        
cufflinks 0.15       Low
cufflinks 0.051       Low
cufflinks 4.318        
cufflinks 8.486        
cufflinks 7.528        
cufflinks 7.156        

0 Strain