Gene : Sobic.009G101300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10555//PTHR10555:SF155 - SORTING NEXIN // SUBFAMILY NOT NAMED Genomic Order:  1043
Name:  ? Sobic.009G101300 Secondary Identifier:  ? PAC:37922632
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G101300 0.5kb upstream 0.5kb upstream 5270 true Chr09: 40453327-40458596 Sorghum bicolor
Sobic.009G101300 0.5kb upstream 0.5kb upstream 500 false Chr09: 40453327-40453826 Sorghum bicolor
Sobic.009G101300 0.5kb downstream 0.5kb downstream 5270 true Chr09: 40453827-40459096 Sorghum bicolor
Sobic.009G101300 0.5kb downstream 0.5kb downstream 500 false Chr09: 40458597-40459096 Sorghum bicolor
Sobic.009G101300 1.0kb upstream 1.0kb upstream 5770 true Chr09: 40452827-40458596 Sorghum bicolor
Sobic.009G101300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 40452827-40453826 Sorghum bicolor
Sobic.009G101300 1.0kb downstream 1.0kb downstream 5770 true Chr09: 40453827-40459596 Sorghum bicolor
Sobic.009G101300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 40458597-40459596 Sorghum bicolor
Sobic.009G101300 2.0kb upstream 2.0kb upstream 6770 true Chr09: 40451827-40458596 Sorghum bicolor
Sobic.009G101300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 40451827-40453826 Sorghum bicolor
Sobic.009G101300 2.0kb downstream 2.0kb downstream 6770 true Chr09: 40453827-40460596 Sorghum bicolor
Sobic.009G101300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 40458597-40460596 Sorghum bicolor
Sobic.009G101300 5.0kb upstream 5.0kb upstream 9770 true Chr09: 40448827-40458596 Sorghum bicolor
Sobic.009G101300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 40448827-40453826 Sorghum bicolor
Sobic.009G101300 5.0kb downstream 5.0kb downstream 9770 true Chr09: 40453827-40463596 Sorghum bicolor
Sobic.009G101300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 40458597-40463596 Sorghum bicolor
Sobic.009G101300 10.0kb upstream 10.0kb upstream 14770 true Chr09: 40443827-40458596 Sorghum bicolor
Sobic.009G101300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 40443827-40453826 Sorghum bicolor
Sobic.009G101300 10.0kb downstream 10.0kb downstream 14770 true Chr09: 40453827-40468596 Sorghum bicolor
Sobic.009G101300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 40458597-40468596 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041026 5273 Angiosperm View MSA
122190014 5267 Panicoideae View MSA
124588439 5269 Grass View MSA
121345182 5274 Embryophyte View MSA
123428162 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.13       High
cufflinks 1.651       Low
cufflinks 2.153       Low
cufflinks 2.973        
cufflinks 4.004       High
cufflinks 2.62        
cufflinks 2.924        
cufflinks 2.014       Low
cufflinks 4.065       High
cufflinks 3.939        
cufflinks 2.734        
cufflinks 3.824        
cufflinks 2.814        
cufflinks 3.506        
cufflinks 2.76        
cufflinks 2.111       Low
cufflinks 3.13        
cufflinks 2.872        
cufflinks 2.436        
cufflinks 4.068       High
cufflinks 3.841        
cufflinks 3.785        
cufflinks 3.29        
cufflinks 3.101        
cufflinks 2.956        
cufflinks 1.67       Low
cufflinks 3.418        
cufflinks 4.431       High
cufflinks 2.917        
cufflinks 3.024        

0 Strain