Protein Family : Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 122190014

Method ID:  5267 Method Name:  Panicoideae
Sequence Alignment:  View MSA Member Count:  9

9 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Seita.3G280900 (1 of 1) PTHR10555//PTHR10555:SF155 - SORTING NEXIN S. italica v2.2 4044   scaffold_3: 25989334-25993377
Zm00008a025657 (1 of 1) PTHR10555//PTHR10555:SF155 - SORTING NEXIN // SUBFAMILY NOT NAMED Z. mays PH207 v1.1 13051   chr06: 138931672-138944722
Pavir.3NG154200 (1 of 2) PTHR10555//PTHR10555:SF155 - SORTING NEXIN // SUBFAMILY NOT NAMED P. virgatum v4.1 4190   Chr03N: 22025050-22029239
Sobic.009G101300 (1 of 1) PTHR10555//PTHR10555:SF155 - SORTING NEXIN // SUBFAMILY NOT NAMED S. bicolor v3.1.1 4770   Chr09: 40453827-40458596
Zm00001d038007 (1 of 1) PTHR10555//PTHR10555:SF155 - SORTING NEXIN // SUBFAMILY NOT NAMED Z. mays RefGen_V4 8933   6: 145000655-145009587
Pahal.3G328400 (1 of 1) PTHR10555//PTHR10555:SF155 - SORTING NEXIN // SUBFAMILY NOT NAMED P. hallii v3.1 4417   Chr03: 25979583-25983999
PhHAL.3G317800 (1 of 1) PTHR10555//PTHR10555:SF155 - SORTING NEXIN // SUBFAMILY NOT NAMED P. hallii HAL v2.1 4388   Chr03: 22657291-22661678
Misin17G108300 (1 of 2) PTHR10555//PTHR10555:SF155 - SORTING NEXIN // SUBFAMILY NOT NAMED M. sinensis v7.1 7441   Chr17: 38214009-38221449
Sevir.3G288600 (1 of 1) PTHR10555//PTHR10555:SF155 - SORTING NEXIN // SUBFAMILY NOT NAMED S. viridis v2.1 4243   Chr_03: 24986829-24991071

9 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Seita.3G280900.1.p S. italica v2.2 122190014 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 1 5267 Panicoideae
Zm00008a025657_P01 Z. mays PH207 v1.1 122190014 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 1 5267 Panicoideae
Pavir.3NG154200.1.p P. virgatum v4.1 122190014 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 1 5267 Panicoideae
Sobic.009G101300.1.p S. bicolor v3.1.1 122190014 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 1 5267 Panicoideae
Zm00001d038007_P001 Z. mays RefGen_V4 122190014 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 1 5267 Panicoideae
Pahal.3G328400.1.p P. hallii v3.1 122190014 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 1 5267 Panicoideae
PhHAL.3G317800.1.p P. hallii HAL v2.1 122190014 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 1 5267 Panicoideae
Misin17G108300.1.p M. sinensis v7.1 122190014 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 1 5267 Panicoideae
Sevir.3G288600.1.p S. viridis v2.1 122190014 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 1 5267 Panicoideae