Gene : Sobic.004G256300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR21297//PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASE II // DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 Genomic Order:  2679
Name:  ? Sobic.004G256300 Secondary Identifier:  ? PAC:37929013
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G256300 0.5kb upstream 0.5kb upstream 4878 true Chr04: 60221312-60226189 Sorghum bicolor
Sobic.004G256300 0.5kb upstream 0.5kb upstream 500 false Chr04: 60221312-60221811 Sorghum bicolor
Sobic.004G256300 0.5kb downstream 0.5kb downstream 4878 true Chr04: 60221812-60226689 Sorghum bicolor
Sobic.004G256300 0.5kb downstream 0.5kb downstream 500 false Chr04: 60226190-60226689 Sorghum bicolor
Sobic.004G256300 1.0kb upstream 1.0kb upstream 5378 true Chr04: 60220812-60226189 Sorghum bicolor
Sobic.004G256300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 60220812-60221811 Sorghum bicolor
Sobic.004G256300 1.0kb downstream 1.0kb downstream 5378 true Chr04: 60221812-60227189 Sorghum bicolor
Sobic.004G256300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 60226190-60227189 Sorghum bicolor
Sobic.004G256300 2.0kb upstream 2.0kb upstream 6378 true Chr04: 60219812-60226189 Sorghum bicolor
Sobic.004G256300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 60219812-60221811 Sorghum bicolor
Sobic.004G256300 2.0kb downstream 2.0kb downstream 6378 true Chr04: 60221812-60228189 Sorghum bicolor
Sobic.004G256300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 60226190-60228189 Sorghum bicolor
Sobic.004G256300 5.0kb upstream 5.0kb upstream 9378 true Chr04: 60216812-60226189 Sorghum bicolor
Sobic.004G256300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 60216812-60221811 Sorghum bicolor
Sobic.004G256300 5.0kb downstream 5.0kb downstream 9378 true Chr04: 60221812-60231189 Sorghum bicolor
Sobic.004G256300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 60226190-60231189 Sorghum bicolor
Sobic.004G256300 10.0kb upstream 10.0kb upstream 14378 true Chr04: 60211812-60226189 Sorghum bicolor
Sobic.004G256300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 60211812-60221811 Sorghum bicolor
Sobic.004G256300 10.0kb downstream 10.0kb downstream 14378 true Chr04: 60221812-60236189 Sorghum bicolor
Sobic.004G256300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 60226190-60236189 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187398 5267 Panicoideae View MSA
124577404 5269 Grass View MSA
122048092 5273 Angiosperm View MSA
123429036 5275 Viridiplantae View MSA
121349369 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.004        
cufflinks 0.718       Low
cufflinks 1.454        
cufflinks 2.357        
cufflinks 3.378        
cufflinks 3.506       High
cufflinks 2.121        
cufflinks 1.331       Low
cufflinks 3.208        
cufflinks 3.212        
cufflinks 1.866        
cufflinks 2.385        
cufflinks 3.266        
cufflinks 1.958        
cufflinks 3.531       High
cufflinks 1.683        
cufflinks 2.078        
cufflinks 2.301        
cufflinks 1.331       Low
cufflinks 2.856        
cufflinks 5.203       High
cufflinks 2.336        
cufflinks 2.234        
cufflinks 2.157        
cufflinks 1.121       Low
cufflinks 0.694       Low
cufflinks 2.36        
cufflinks 1.084       Low
cufflinks 1.58        
cufflinks 4.076       High

0 Strain