Gene : Sobic.004G257100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10766//PTHR10766:SF53 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2688
Name:  ? Sobic.004G257100 Secondary Identifier:  ? PAC:37933529
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G257100 0.5kb upstream 0.5kb upstream 5454 true Chr04: 60292091-60297544 Sorghum bicolor
Sobic.004G257100 0.5kb upstream 0.5kb upstream 500 false Chr04: 60297045-60297544 Sorghum bicolor
Sobic.004G257100 0.5kb downstream 0.5kb downstream 5454 true Chr04: 60291591-60297044 Sorghum bicolor
Sobic.004G257100 0.5kb downstream 0.5kb downstream 500 false Chr04: 60291591-60292090 Sorghum bicolor
Sobic.004G257100 1.0kb upstream 1.0kb upstream 5954 true Chr04: 60292091-60298044 Sorghum bicolor
Sobic.004G257100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 60297045-60298044 Sorghum bicolor
Sobic.004G257100 1.0kb downstream 1.0kb downstream 5954 true Chr04: 60291091-60297044 Sorghum bicolor
Sobic.004G257100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 60291091-60292090 Sorghum bicolor
Sobic.004G257100 2.0kb upstream 2.0kb upstream 6954 true Chr04: 60292091-60299044 Sorghum bicolor
Sobic.004G257100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 60297045-60299044 Sorghum bicolor
Sobic.004G257100 2.0kb downstream 2.0kb downstream 6954 true Chr04: 60290091-60297044 Sorghum bicolor
Sobic.004G257100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 60290091-60292090 Sorghum bicolor
Sobic.004G257100 5.0kb upstream 5.0kb upstream 9954 true Chr04: 60292091-60302044 Sorghum bicolor
Sobic.004G257100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 60297045-60302044 Sorghum bicolor
Sobic.004G257100 5.0kb downstream 5.0kb downstream 9954 true Chr04: 60287091-60297044 Sorghum bicolor
Sobic.004G257100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 60287091-60292090 Sorghum bicolor
Sobic.004G257100 10.0kb upstream 10.0kb upstream 14954 true Chr04: 60292091-60307044 Sorghum bicolor
Sobic.004G257100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 60297045-60307044 Sorghum bicolor
Sobic.004G257100 10.0kb downstream 10.0kb downstream 14954 true Chr04: 60282091-60297044 Sorghum bicolor
Sobic.004G257100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 60282091-60292090 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194819 5267 Panicoideae View MSA
124576681 5269 Grass View MSA
122044185 5273 Angiosperm View MSA
121349188 5274 Embryophyte View MSA
123426870 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.265     High  
cufflinks 16.614     High Low
cufflinks 51.551     High High
cufflinks 46.421     High  
cufflinks 43.118     High  
cufflinks 28.027     High  
cufflinks 31.538     High  
cufflinks 18.159     High Low
cufflinks 49.23     High  
cufflinks 47.559     High  
cufflinks 30.614     High  
cufflinks 40.65     High  
cufflinks 50.009     High High
cufflinks 41.728     High  
cufflinks 40.904     High  
cufflinks 32.464     High  
cufflinks 32.403     High  
cufflinks 32.632     High  
cufflinks 33.828     High  
cufflinks 45.809     High  
cufflinks 44.09     High  
cufflinks 36.201     High  
cufflinks 41.241     High  
cufflinks 41.64     High  
cufflinks 26.59     High  
cufflinks 14.788     High Low
cufflinks 37.214     High  
cufflinks 18.163     High Low
cufflinks 29.221     High  
cufflinks 42.801     High  

0 Strain