Gene : Sobic.004G293400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22952//PTHR22952:SF17 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN B Genomic Order:  3077
Name:  ? Sobic.004G293400 Secondary Identifier:  ? PAC:37928888
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G293400 0.5kb upstream 0.5kb upstream 6334 true Chr04: 63356457-63362790 Sorghum bicolor
Sobic.004G293400 0.5kb upstream 0.5kb upstream 500 false Chr04: 63356457-63356956 Sorghum bicolor
Sobic.004G293400 0.5kb downstream 0.5kb downstream 6334 true Chr04: 63356957-63363290 Sorghum bicolor
Sobic.004G293400 0.5kb downstream 0.5kb downstream 500 false Chr04: 63362791-63363290 Sorghum bicolor
Sobic.004G293400 1.0kb upstream 1.0kb upstream 6834 true Chr04: 63355957-63362790 Sorghum bicolor
Sobic.004G293400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 63355957-63356956 Sorghum bicolor
Sobic.004G293400 1.0kb downstream 1.0kb downstream 6834 true Chr04: 63356957-63363790 Sorghum bicolor
Sobic.004G293400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 63362791-63363790 Sorghum bicolor
Sobic.004G293400 2.0kb upstream 2.0kb upstream 7834 true Chr04: 63354957-63362790 Sorghum bicolor
Sobic.004G293400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 63354957-63356956 Sorghum bicolor
Sobic.004G293400 2.0kb downstream 2.0kb downstream 7834 true Chr04: 63356957-63364790 Sorghum bicolor
Sobic.004G293400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 63362791-63364790 Sorghum bicolor
Sobic.004G293400 5.0kb upstream 5.0kb upstream 10834 true Chr04: 63351957-63362790 Sorghum bicolor
Sobic.004G293400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 63351957-63356956 Sorghum bicolor
Sobic.004G293400 5.0kb downstream 5.0kb downstream 10834 true Chr04: 63356957-63367790 Sorghum bicolor
Sobic.004G293400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 63362791-63367790 Sorghum bicolor
Sobic.004G293400 10.0kb upstream 10.0kb upstream 15834 true Chr04: 63346957-63362790 Sorghum bicolor
Sobic.004G293400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 63346957-63356956 Sorghum bicolor
Sobic.004G293400 10.0kb downstream 10.0kb downstream 15834 true Chr04: 63356957-63372790 Sorghum bicolor
Sobic.004G293400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 63362791-63372790 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026418 5273 Angiosperm View MSA
122188151 5267 Panicoideae View MSA
124569900 5269 Grass View MSA
121296320 5274 Embryophyte View MSA
123334502 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.745       High
cufflinks 0.132        
cufflinks 0.07       Low
cufflinks 0.072     Low Low
cufflinks 0.149        
cufflinks 0.686       High
cufflinks 0.231        
cufflinks 0.299        
cufflinks 0.289        
cufflinks 0.234        
cufflinks 0.039     Low Low
cufflinks 0.192        
cufflinks 0.439       High
cufflinks 0.183        
cufflinks 0.3        
cufflinks 0.122        
cufflinks 0.179        
cufflinks 0.212        
cufflinks 0.178        
cufflinks 0.173        
cufflinks 0.279        
cufflinks 0.198        
cufflinks 0.174        
cufflinks 0.164        
cufflinks 0.138        
cufflinks 0.209        
cufflinks 0.088     Low Low
cufflinks 1.015       High
cufflinks 0.318        
cufflinks 0.243        

0 Strain