Gene : Sobic.004G288100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13505:SF7 - TRANSMEMBRANE PROTEIN 208 Genomic Order:  3021
Name:  ? Sobic.004G288100 Secondary Identifier:  ? PAC:37933948
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G288100 0.5kb upstream 0.5kb upstream 3276 true Chr04: 62989457-62992732 Sorghum bicolor
Sobic.004G288100 0.5kb upstream 0.5kb upstream 500 false Chr04: 62989457-62989956 Sorghum bicolor
Sobic.004G288100 0.5kb downstream 0.5kb downstream 3276 true Chr04: 62989957-62993232 Sorghum bicolor
Sobic.004G288100 0.5kb downstream 0.5kb downstream 500 false Chr04: 62992733-62993232 Sorghum bicolor
Sobic.004G288100 1.0kb upstream 1.0kb upstream 3776 true Chr04: 62988957-62992732 Sorghum bicolor
Sobic.004G288100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 62988957-62989956 Sorghum bicolor
Sobic.004G288100 1.0kb downstream 1.0kb downstream 3776 true Chr04: 62989957-62993732 Sorghum bicolor
Sobic.004G288100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 62992733-62993732 Sorghum bicolor
Sobic.004G288100 2.0kb upstream 2.0kb upstream 4776 true Chr04: 62987957-62992732 Sorghum bicolor
Sobic.004G288100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 62987957-62989956 Sorghum bicolor
Sobic.004G288100 2.0kb downstream 2.0kb downstream 4776 true Chr04: 62989957-62994732 Sorghum bicolor
Sobic.004G288100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 62992733-62994732 Sorghum bicolor
Sobic.004G288100 5.0kb upstream 5.0kb upstream 7776 true Chr04: 62984957-62992732 Sorghum bicolor
Sobic.004G288100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 62984957-62989956 Sorghum bicolor
Sobic.004G288100 5.0kb downstream 5.0kb downstream 7776 true Chr04: 62989957-62997732 Sorghum bicolor
Sobic.004G288100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 62992733-62997732 Sorghum bicolor
Sobic.004G288100 10.0kb upstream 10.0kb upstream 12776 true Chr04: 62979957-62992732 Sorghum bicolor
Sobic.004G288100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 62979957-62989956 Sorghum bicolor
Sobic.004G288100 10.0kb downstream 10.0kb downstream 12776 true Chr04: 62989957-63002732 Sorghum bicolor
Sobic.004G288100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 62992733-63002732 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175679 5267 Panicoideae View MSA
124576898 5269 Grass View MSA
122042916 5273 Angiosperm View MSA
121345571 5274 Embryophyte View MSA
123425325 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.888     High High
cufflinks 5.282       Low
cufflinks 12.303     High  
cufflinks 17.361     High  
cufflinks 10.036        
cufflinks 9.748        
cufflinks 12.99     High  
cufflinks 5.966       Low
cufflinks 13.962     High  
cufflinks 14.124     High  
cufflinks 12.515     High  
cufflinks 13.96     High  
cufflinks 11.737     High  
cufflinks 14.526     High  
cufflinks 13.938     High  
cufflinks 13.15     High  
cufflinks 18.638     High High
cufflinks 17.593     High High
cufflinks 7.303       Low
cufflinks 24.51     High High
cufflinks 8.676        
cufflinks 15.065     High  
cufflinks 17.116     High  
cufflinks 15.137     High  
cufflinks 8.127       Low
cufflinks 3.995       Low
cufflinks 13.295     High  
cufflinks 8.805        
cufflinks 12.837     High  
cufflinks 14.853     High  

0 Strain