Gene : Sobic.004G281700 S. bicolor v3.1.1
Defline:  (1 of 3) PF06884 - Protein of unknown function (DUF1264) (DUF1264) Genomic Order:  2947
Name:  ? Sobic.004G281700 Secondary Identifier:  ? PAC:37932016
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G281700 0.5kb upstream 0.5kb upstream 1515 true Chr04: 62396817-62398331 Sorghum bicolor
Sobic.004G281700 0.5kb upstream 0.5kb upstream 500 false Chr04: 62396817-62397316 Sorghum bicolor
Sobic.004G281700 0.5kb downstream 0.5kb downstream 1515 true Chr04: 62397317-62398831 Sorghum bicolor
Sobic.004G281700 0.5kb downstream 0.5kb downstream 500 false Chr04: 62398332-62398831 Sorghum bicolor
Sobic.004G281700 1.0kb upstream 1.0kb upstream 2015 true Chr04: 62396317-62398331 Sorghum bicolor
Sobic.004G281700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 62396317-62397316 Sorghum bicolor
Sobic.004G281700 1.0kb downstream 1.0kb downstream 2015 true Chr04: 62397317-62399331 Sorghum bicolor
Sobic.004G281700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 62398332-62399331 Sorghum bicolor
Sobic.004G281700 2.0kb upstream 2.0kb upstream 3015 true Chr04: 62395317-62398331 Sorghum bicolor
Sobic.004G281700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 62395317-62397316 Sorghum bicolor
Sobic.004G281700 2.0kb downstream 2.0kb downstream 3015 true Chr04: 62397317-62400331 Sorghum bicolor
Sobic.004G281700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 62398332-62400331 Sorghum bicolor
Sobic.004G281700 5.0kb upstream 5.0kb upstream 6015 true Chr04: 62392317-62398331 Sorghum bicolor
Sobic.004G281700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 62392317-62397316 Sorghum bicolor
Sobic.004G281700 5.0kb downstream 5.0kb downstream 6015 true Chr04: 62397317-62403331 Sorghum bicolor
Sobic.004G281700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 62398332-62403331 Sorghum bicolor
Sobic.004G281700 10.0kb upstream 10.0kb upstream 11015 true Chr04: 62387317-62398331 Sorghum bicolor
Sobic.004G281700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 62387317-62397316 Sorghum bicolor
Sobic.004G281700 10.0kb downstream 10.0kb downstream 11015 true Chr04: 62397317-62408331 Sorghum bicolor
Sobic.004G281700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 62398332-62408331 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189123 5267 Panicoideae View MSA
124573848 5269 Grass View MSA
122042151 5273 Angiosperm View MSA
121350259 5274 Embryophyte View MSA
123426811 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.342     High High
cufflinks 0.252        
cufflinks 1.012        
cufflinks 1.521        
cufflinks 0.108        
cufflinks 5.763       High
cufflinks 0.086     Low  
cufflinks 0.648        
cufflinks 0.714        
cufflinks 0.539        
cufflinks 0.17        
cufflinks 0.166        
cufflinks 2.438        
cufflinks 0.067     Low  
cufflinks 0.741        
cufflinks 1.142        
cufflinks 0.172        
cufflinks 0.102        
cufflinks 1.254        
cufflinks 0.338        
cufflinks 0.028     Low Low
cufflinks 0.268        
cufflinks 0.044     Low Low
cufflinks 0.052     Low  
cufflinks 0.332        
cufflinks 0.207        
cufflinks 0.703        
cufflinks 2764.367     High High
cufflinks 0.602        
cufflinks 0.296        

0 Strain