Gene : Sobic.004G281600 S. bicolor v3.1.1
Defline:  (1 of 2) K16052 - MscS family membrane protein (ynaI, mscMJ, MSL) Genomic Order:  2946
Name:  ? Sobic.004G281600 Secondary Identifier:  ? PAC:37932723
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G281600 0.5kb upstream 0.5kb upstream 5345 true Chr04: 62389615-62394959 Sorghum bicolor
Sobic.004G281600 0.5kb upstream 0.5kb upstream 500 false Chr04: 62394460-62394959 Sorghum bicolor
Sobic.004G281600 0.5kb downstream 0.5kb downstream 5345 true Chr04: 62389115-62394459 Sorghum bicolor
Sobic.004G281600 0.5kb downstream 0.5kb downstream 500 false Chr04: 62389115-62389614 Sorghum bicolor
Sobic.004G281600 1.0kb upstream 1.0kb upstream 5845 true Chr04: 62389615-62395459 Sorghum bicolor
Sobic.004G281600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 62394460-62395459 Sorghum bicolor
Sobic.004G281600 1.0kb downstream 1.0kb downstream 5845 true Chr04: 62388615-62394459 Sorghum bicolor
Sobic.004G281600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 62388615-62389614 Sorghum bicolor
Sobic.004G281600 2.0kb upstream 2.0kb upstream 6845 true Chr04: 62389615-62396459 Sorghum bicolor
Sobic.004G281600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 62394460-62396459 Sorghum bicolor
Sobic.004G281600 2.0kb downstream 2.0kb downstream 6845 true Chr04: 62387615-62394459 Sorghum bicolor
Sobic.004G281600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 62387615-62389614 Sorghum bicolor
Sobic.004G281600 5.0kb upstream 5.0kb upstream 9845 true Chr04: 62389615-62399459 Sorghum bicolor
Sobic.004G281600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 62394460-62399459 Sorghum bicolor
Sobic.004G281600 5.0kb downstream 5.0kb downstream 9845 true Chr04: 62384615-62394459 Sorghum bicolor
Sobic.004G281600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 62384615-62389614 Sorghum bicolor
Sobic.004G281600 10.0kb upstream 10.0kb upstream 14845 true Chr04: 62389615-62404459 Sorghum bicolor
Sobic.004G281600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 62394460-62404459 Sorghum bicolor
Sobic.004G281600 10.0kb downstream 10.0kb downstream 14845 true Chr04: 62379615-62394459 Sorghum bicolor
Sobic.004G281600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 62379615-62389614 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994542 5273 Angiosperm View MSA
122175605 5267 Panicoideae View MSA
124584626 5269 Grass View MSA
121351031 5274 Embryophyte View MSA
123427972 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.111       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.012     Low  
cufflinks 0.119       High
cufflinks 0.018     Low  
cufflinks 0.009     Low  
cufflinks 0.003     Low Low
cufflinks 0.17       High
cufflinks 0.067     Low  
cufflinks 0.013     Low  
cufflinks 0.004     Low Low
cufflinks 0.075        
cufflinks 0.009     Low  
cufflinks 0.06     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.006     Low  
cufflinks 0.002     Low Low
cufflinks 0.022     Low  
cufflinks 0.552       High
cufflinks 0.014     Low  
cufflinks 0.012     Low  
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.111       High
cufflinks 0.449       High
cufflinks 0.01     Low  
cufflinks 0.062     Low  

0 Strain