Gene : Sobic.009G225900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10902//PTHR10902:SF4 - 60S RIBOSOMAL PROTEIN L35A // SUBFAMILY NOT NAMED Genomic Order:  2332
Name:  ? Sobic.009G225900 Secondary Identifier:  ? PAC:37922037
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G225900 0.5kb upstream 0.5kb upstream 3818 true Chr09: 56778967-56782784 Sorghum bicolor
Sobic.009G225900 0.5kb upstream 0.5kb upstream 500 false Chr09: 56778967-56779466 Sorghum bicolor
Sobic.009G225900 0.5kb downstream 0.5kb downstream 3818 true Chr09: 56779467-56783284 Sorghum bicolor
Sobic.009G225900 0.5kb downstream 0.5kb downstream 500 false Chr09: 56782785-56783284 Sorghum bicolor
Sobic.009G225900 1.0kb upstream 1.0kb upstream 4318 true Chr09: 56778467-56782784 Sorghum bicolor
Sobic.009G225900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 56778467-56779466 Sorghum bicolor
Sobic.009G225900 1.0kb downstream 1.0kb downstream 4318 true Chr09: 56779467-56783784 Sorghum bicolor
Sobic.009G225900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 56782785-56783784 Sorghum bicolor
Sobic.009G225900 2.0kb upstream 2.0kb upstream 5318 true Chr09: 56777467-56782784 Sorghum bicolor
Sobic.009G225900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 56777467-56779466 Sorghum bicolor
Sobic.009G225900 2.0kb downstream 2.0kb downstream 5318 true Chr09: 56779467-56784784 Sorghum bicolor
Sobic.009G225900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 56782785-56784784 Sorghum bicolor
Sobic.009G225900 5.0kb upstream 5.0kb upstream 8318 true Chr09: 56774467-56782784 Sorghum bicolor
Sobic.009G225900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 56774467-56779466 Sorghum bicolor
Sobic.009G225900 5.0kb downstream 5.0kb downstream 8318 true Chr09: 56779467-56787784 Sorghum bicolor
Sobic.009G225900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 56782785-56787784 Sorghum bicolor
Sobic.009G225900 10.0kb upstream 10.0kb upstream 13318 true Chr09: 56769467-56782784 Sorghum bicolor
Sobic.009G225900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 56769467-56779466 Sorghum bicolor
Sobic.009G225900 10.0kb downstream 10.0kb downstream 13318 true Chr09: 56779467-56792784 Sorghum bicolor
Sobic.009G225900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 56782785-56792784 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189944 5267 Panicoideae View MSA
124589102 5269 Grass View MSA
122043317 5273 Angiosperm View MSA
121349974 5274 Embryophyte View MSA
123428152 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.178       High
cufflinks 0.264       Low
cufflinks 0.294       Low
cufflinks 0.775        
cufflinks 1.232        
cufflinks 1.49        
cufflinks 1.181        
cufflinks 0.261       Low
cufflinks 1.189        
cufflinks 1.407        
cufflinks 1.439        
cufflinks 2.051        
cufflinks 1.029        
cufflinks 2.211        
cufflinks 0.831        
cufflinks 0.542        
cufflinks 1.207        
cufflinks 1.111        
cufflinks 0.695        
cufflinks 1.515        
cufflinks 3.504       High
cufflinks 2.706       High
cufflinks 2.077        
cufflinks 1.894        
cufflinks 0.258       Low
cufflinks 0.174       Low
cufflinks 0.675        
cufflinks 1.349        
cufflinks 0.693        
cufflinks 1.119        

0 Strain