Gene : Sobic.004G270400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11785//PTHR11785:SF412 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  2829
Name:  ? Sobic.004G270400 Secondary Identifier:  ? PAC:37929265
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G270400 0.5kb upstream 0.5kb upstream 6076 true Chr04: 61465869-61471944 Sorghum bicolor
Sobic.004G270400 0.5kb upstream 0.5kb upstream 500 false Chr04: 61465869-61466368 Sorghum bicolor
Sobic.004G270400 0.5kb downstream 0.5kb downstream 6076 true Chr04: 61466369-61472444 Sorghum bicolor
Sobic.004G270400 0.5kb downstream 0.5kb downstream 500 false Chr04: 61471945-61472444 Sorghum bicolor
Sobic.004G270400 1.0kb upstream 1.0kb upstream 6576 true Chr04: 61465369-61471944 Sorghum bicolor
Sobic.004G270400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 61465369-61466368 Sorghum bicolor
Sobic.004G270400 1.0kb downstream 1.0kb downstream 6576 true Chr04: 61466369-61472944 Sorghum bicolor
Sobic.004G270400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 61471945-61472944 Sorghum bicolor
Sobic.004G270400 2.0kb upstream 2.0kb upstream 7576 true Chr04: 61464369-61471944 Sorghum bicolor
Sobic.004G270400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 61464369-61466368 Sorghum bicolor
Sobic.004G270400 2.0kb downstream 2.0kb downstream 7576 true Chr04: 61466369-61473944 Sorghum bicolor
Sobic.004G270400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 61471945-61473944 Sorghum bicolor
Sobic.004G270400 5.0kb upstream 5.0kb upstream 10576 true Chr04: 61461369-61471944 Sorghum bicolor
Sobic.004G270400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 61461369-61466368 Sorghum bicolor
Sobic.004G270400 5.0kb downstream 5.0kb downstream 10576 true Chr04: 61466369-61476944 Sorghum bicolor
Sobic.004G270400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 61471945-61476944 Sorghum bicolor
Sobic.004G270400 10.0kb upstream 10.0kb upstream 15576 true Chr04: 61456369-61471944 Sorghum bicolor
Sobic.004G270400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 61456369-61466368 Sorghum bicolor
Sobic.004G270400 10.0kb downstream 10.0kb downstream 15576 true Chr04: 61466369-61481944 Sorghum bicolor
Sobic.004G270400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 61471945-61481944 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178795 5267 Panicoideae View MSA
124574950 5269 Grass View MSA
122043396 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.575       High
cufflinks 0.03     Low Low
cufflinks 0.121        
cufflinks 0.448        
cufflinks 0.015     Low Low
cufflinks 0.379        
cufflinks 0.094     Low  
cufflinks 0.106        
cufflinks 0.871       High
cufflinks 0.8       High
cufflinks 0.341        
cufflinks 0.621       High
cufflinks 0.192        
cufflinks 0.555        
cufflinks 0.112        
cufflinks 0.147        
cufflinks 0.063     Low  
cufflinks 0.027     Low Low
cufflinks 0.096        
cufflinks 0.221        
cufflinks 0.025     Low Low
cufflinks 0.281        
cufflinks 0.309        
cufflinks 0.254        
cufflinks 0.315        
cufflinks 0.037     Low Low
cufflinks 0.361        
cufflinks 3.943       High
cufflinks 0.075     Low  
cufflinks 0.116        

0 Strain