Gene : Sobic.009G167700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12210//PTHR12210:SF72 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1726
Name:  ? Sobic.009G167700 Secondary Identifier:  ? PAC:37921641
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G167700 0.5kb upstream 0.5kb upstream 3256 true Chr09: 52370893-52374148 Sorghum bicolor
Sobic.009G167700 0.5kb upstream 0.5kb upstream 500 false Chr09: 52370893-52371392 Sorghum bicolor
Sobic.009G167700 0.5kb downstream 0.5kb downstream 3256 true Chr09: 52371393-52374648 Sorghum bicolor
Sobic.009G167700 0.5kb downstream 0.5kb downstream 500 false Chr09: 52374149-52374648 Sorghum bicolor
Sobic.009G167700 1.0kb upstream 1.0kb upstream 3756 true Chr09: 52370393-52374148 Sorghum bicolor
Sobic.009G167700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 52370393-52371392 Sorghum bicolor
Sobic.009G167700 1.0kb downstream 1.0kb downstream 3756 true Chr09: 52371393-52375148 Sorghum bicolor
Sobic.009G167700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 52374149-52375148 Sorghum bicolor
Sobic.009G167700 2.0kb upstream 2.0kb upstream 4756 true Chr09: 52369393-52374148 Sorghum bicolor
Sobic.009G167700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 52369393-52371392 Sorghum bicolor
Sobic.009G167700 2.0kb downstream 2.0kb downstream 4756 true Chr09: 52371393-52376148 Sorghum bicolor
Sobic.009G167700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 52374149-52376148 Sorghum bicolor
Sobic.009G167700 5.0kb upstream 5.0kb upstream 7756 true Chr09: 52366393-52374148 Sorghum bicolor
Sobic.009G167700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 52366393-52371392 Sorghum bicolor
Sobic.009G167700 5.0kb downstream 5.0kb downstream 7756 true Chr09: 52371393-52379148 Sorghum bicolor
Sobic.009G167700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 52374149-52379148 Sorghum bicolor
Sobic.009G167700 10.0kb upstream 10.0kb upstream 12756 true Chr09: 52361393-52374148 Sorghum bicolor
Sobic.009G167700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 52361393-52371392 Sorghum bicolor
Sobic.009G167700 10.0kb downstream 10.0kb downstream 12756 true Chr09: 52371393-52384148 Sorghum bicolor
Sobic.009G167700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 52374149-52384148 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177627 5267 Panicoideae View MSA
124582186 5269 Grass View MSA
122050524 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121311967 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.684     High  
cufflinks 3.284       Low
cufflinks 6.647        
cufflinks 17.073     High High
cufflinks 3.732       Low
cufflinks 21.165     High High
cufflinks 7.303        
cufflinks 4.906        
cufflinks 11.376        
cufflinks 11.19        
cufflinks 11.373        
cufflinks 17.324     High High
cufflinks 9.571        
cufflinks 14.185     High High
cufflinks 9.7        
cufflinks 5.977        
cufflinks 8.836        
cufflinks 7.491        
cufflinks 4.711        
cufflinks 17.587     High High
cufflinks 3.395       Low
cufflinks 9.318        
cufflinks 14.298     High High
cufflinks 11.855     High  
cufflinks 6.1        
cufflinks 2.911       Low
cufflinks 11.61     High  
cufflinks 2.687       Low
cufflinks 5.314        
cufflinks 8.847        

0 Strain