Gene : Sobic.009G166600 S. bicolor v3.1.1
Defline:  (1 of 1) 3.6.1.5//3.6.1.6 - Apyrase / ATP-diphosphohydrolase // Nucleoside diphosphate phosphatase / Nucleoside-diphosphatase Genomic Order:  1714
Name:  ? Sobic.009G166600 Secondary Identifier:  ? PAC:37920127
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6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6545 Sorghum bicolor pathologic  
Sbicolor PWY-7177 Sorghum bicolor pathologic  
Sbicolor PWY-7184 Sorghum bicolor pathologic  
Sbicolor PWY-7185 Sorghum bicolor pathologic  
Sbicolor PWY-7210 Sorghum bicolor pathologic  
Sbicolor PWY-7211 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G166600 0.5kb upstream 0.5kb upstream 3811 true Chr09: 52302442-52306252 Sorghum bicolor
Sobic.009G166600 0.5kb upstream 0.5kb upstream 500 false Chr09: 52305753-52306252 Sorghum bicolor
Sobic.009G166600 0.5kb downstream 0.5kb downstream 3811 true Chr09: 52301942-52305752 Sorghum bicolor
Sobic.009G166600 0.5kb downstream 0.5kb downstream 500 false Chr09: 52301942-52302441 Sorghum bicolor
Sobic.009G166600 1.0kb upstream 1.0kb upstream 4311 true Chr09: 52302442-52306752 Sorghum bicolor
Sobic.009G166600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 52305753-52306752 Sorghum bicolor
Sobic.009G166600 1.0kb downstream 1.0kb downstream 4311 true Chr09: 52301442-52305752 Sorghum bicolor
Sobic.009G166600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 52301442-52302441 Sorghum bicolor
Sobic.009G166600 2.0kb upstream 2.0kb upstream 5311 true Chr09: 52302442-52307752 Sorghum bicolor
Sobic.009G166600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 52305753-52307752 Sorghum bicolor
Sobic.009G166600 2.0kb downstream 2.0kb downstream 5311 true Chr09: 52300442-52305752 Sorghum bicolor
Sobic.009G166600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 52300442-52302441 Sorghum bicolor
Sobic.009G166600 5.0kb upstream 5.0kb upstream 8311 true Chr09: 52302442-52310752 Sorghum bicolor
Sobic.009G166600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 52305753-52310752 Sorghum bicolor
Sobic.009G166600 5.0kb downstream 5.0kb downstream 8311 true Chr09: 52297442-52305752 Sorghum bicolor
Sobic.009G166600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 52297442-52302441 Sorghum bicolor
Sobic.009G166600 10.0kb upstream 10.0kb upstream 13311 true Chr09: 52302442-52315752 Sorghum bicolor
Sobic.009G166600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 52305753-52315752 Sorghum bicolor
Sobic.009G166600 10.0kb downstream 10.0kb downstream 13311 true Chr09: 52292442-52305752 Sorghum bicolor
Sobic.009G166600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 52292442-52302441 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177510 5267 Panicoideae View MSA
124577961 5269 Grass View MSA
122042120 5273 Angiosperm View MSA
121349143 5274 Embryophyte View MSA
123426899 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.0     High High
cufflinks 7.502     High Low
cufflinks 7.141       Low
cufflinks 8.685       Low
cufflinks 19.629     High  
cufflinks 13.259        
cufflinks 13.563     High  
cufflinks 5.625       Low
cufflinks 18.868     High  
cufflinks 20.006     High  
cufflinks 14.274     High  
cufflinks 22.454     High High
cufflinks 21.146     High High
cufflinks 18.919     High  
cufflinks 14.83     High  
cufflinks 10.447     High  
cufflinks 13.312     High  
cufflinks 15.097     High  
cufflinks 12.443     High  
cufflinks 18.103     High  
cufflinks 20.169     High  
cufflinks 16.842     High  
cufflinks 22.262     High High
cufflinks 20.215     High  
cufflinks 7.835       Low
cufflinks 7.269     High Low
cufflinks 10.15        
cufflinks 6.276       Low
cufflinks 8.825       Low
cufflinks 15.573     High  

0 Strain