Gene : Sobic.004G307600 S. bicolor v3.1.1
Defline:  (1 of 1) K14168 - cytoplasmic tRNA 2-thiolation protein 1 (CTU1, NCS6) Genomic Order:  3230
Name:  ? Sobic.004G307600 Secondary Identifier:  ? PAC:37931806
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G307600 0.5kb upstream 0.5kb upstream 4042 true Chr04: 64524270-64528311 Sorghum bicolor
Sobic.004G307600 0.5kb upstream 0.5kb upstream 500 false Chr04: 64527812-64528311 Sorghum bicolor
Sobic.004G307600 0.5kb downstream 0.5kb downstream 4042 true Chr04: 64523770-64527811 Sorghum bicolor
Sobic.004G307600 0.5kb downstream 0.5kb downstream 500 false Chr04: 64523770-64524269 Sorghum bicolor
Sobic.004G307600 1.0kb upstream 1.0kb upstream 4542 true Chr04: 64524270-64528811 Sorghum bicolor
Sobic.004G307600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 64527812-64528811 Sorghum bicolor
Sobic.004G307600 1.0kb downstream 1.0kb downstream 4542 true Chr04: 64523270-64527811 Sorghum bicolor
Sobic.004G307600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 64523270-64524269 Sorghum bicolor
Sobic.004G307600 2.0kb upstream 2.0kb upstream 5542 true Chr04: 64524270-64529811 Sorghum bicolor
Sobic.004G307600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 64527812-64529811 Sorghum bicolor
Sobic.004G307600 2.0kb downstream 2.0kb downstream 5542 true Chr04: 64522270-64527811 Sorghum bicolor
Sobic.004G307600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 64522270-64524269 Sorghum bicolor
Sobic.004G307600 5.0kb upstream 5.0kb upstream 8542 true Chr04: 64524270-64532811 Sorghum bicolor
Sobic.004G307600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 64527812-64532811 Sorghum bicolor
Sobic.004G307600 5.0kb downstream 5.0kb downstream 8542 true Chr04: 64519270-64527811 Sorghum bicolor
Sobic.004G307600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 64519270-64524269 Sorghum bicolor
Sobic.004G307600 10.0kb upstream 10.0kb upstream 13542 true Chr04: 64524270-64537811 Sorghum bicolor
Sobic.004G307600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 64527812-64537811 Sorghum bicolor
Sobic.004G307600 10.0kb downstream 10.0kb downstream 13542 true Chr04: 64514270-64527811 Sorghum bicolor
Sobic.004G307600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 64514270-64524269 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194997 5267 Panicoideae View MSA
124582937 5269 Grass View MSA
122048376 5273 Angiosperm View MSA
121346123 5274 Embryophyte View MSA
123424890 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.494       High
cufflinks 1.376       Low
cufflinks 4.122        
cufflinks 6.171        
cufflinks 6.177        
cufflinks 7.729       High
cufflinks 3.552        
cufflinks 1.363       Low
cufflinks 9.659       High
cufflinks 10.224       High
cufflinks 4.073        
cufflinks 5.325        
cufflinks 8.116       High
cufflinks 4.039        
cufflinks 4.732        
cufflinks 3.427        
cufflinks 3.581        
cufflinks 3.507        
cufflinks 2.968        
cufflinks 5.852        
cufflinks 3.985        
cufflinks 4.732        
cufflinks 4.385        
cufflinks 4.246        
cufflinks 2.651       Low
cufflinks 1.687       Low
cufflinks 4.631        
cufflinks 1.491       Low
cufflinks 2.16       Low
cufflinks 5.033        

0 Strain