Gene : Sobic.009G180800 S. bicolor v3.1.1
Defline:  (1 of 1) K01845 - glutamate-1-semialdehyde 2,1-aminomutase (hemL) Genomic Order:  1870
Name:  ? Sobic.009G180800 Secondary Identifier:  ? PAC:37921885
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-5188 Sorghum bicolor pathologic  
Sbicolor PWY-5918 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G180800 0.5kb upstream 0.5kb upstream 4323 true Chr09: 53494575-53498897 Sorghum bicolor
Sobic.009G180800 0.5kb upstream 0.5kb upstream 500 false Chr09: 53498398-53498897 Sorghum bicolor
Sobic.009G180800 0.5kb downstream 0.5kb downstream 4323 true Chr09: 53494075-53498397 Sorghum bicolor
Sobic.009G180800 0.5kb downstream 0.5kb downstream 500 false Chr09: 53494075-53494574 Sorghum bicolor
Sobic.009G180800 1.0kb upstream 1.0kb upstream 4823 true Chr09: 53494575-53499397 Sorghum bicolor
Sobic.009G180800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 53498398-53499397 Sorghum bicolor
Sobic.009G180800 1.0kb downstream 1.0kb downstream 4823 true Chr09: 53493575-53498397 Sorghum bicolor
Sobic.009G180800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 53493575-53494574 Sorghum bicolor
Sobic.009G180800 2.0kb upstream 2.0kb upstream 5823 true Chr09: 53494575-53500397 Sorghum bicolor
Sobic.009G180800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 53498398-53500397 Sorghum bicolor
Sobic.009G180800 2.0kb downstream 2.0kb downstream 5823 true Chr09: 53492575-53498397 Sorghum bicolor
Sobic.009G180800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 53492575-53494574 Sorghum bicolor
Sobic.009G180800 5.0kb upstream 5.0kb upstream 8823 true Chr09: 53494575-53503397 Sorghum bicolor
Sobic.009G180800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 53498398-53503397 Sorghum bicolor
Sobic.009G180800 5.0kb downstream 5.0kb downstream 8823 true Chr09: 53489575-53498397 Sorghum bicolor
Sobic.009G180800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 53489575-53494574 Sorghum bicolor
Sobic.009G180800 10.0kb upstream 10.0kb upstream 13823 true Chr09: 53494575-53508397 Sorghum bicolor
Sobic.009G180800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 53498398-53508397 Sorghum bicolor
Sobic.009G180800 10.0kb downstream 10.0kb downstream 13823 true Chr09: 53484575-53498397 Sorghum bicolor
Sobic.009G180800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 53484575-53494574 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179539 5267 Panicoideae View MSA
124575850 5269 Grass View MSA
122042723 5273 Angiosperm View MSA
121344584 5274 Embryophyte View MSA
123423890 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.125     High  
cufflinks 8.817     High Low
cufflinks 21.667     High  
cufflinks 21.233     High  
cufflinks 24.105     High  
cufflinks 14.559     High  
cufflinks 73.087     High High
cufflinks 98.244     High High
cufflinks 21.578     High  
cufflinks 16.316     High  
cufflinks 13.41     High  
cufflinks 11.172        
cufflinks 14.818     High  
cufflinks 13.662     High  
cufflinks 17.975     High  
cufflinks 12.998     High  
cufflinks 76.438     High High
cufflinks 87.814     High High
cufflinks 27.977     High  
cufflinks 33.128     High  
cufflinks 20.624     High  
cufflinks 11.692        
cufflinks 13.4     High  
cufflinks 14.524     High  
cufflinks 4.631       Low
cufflinks 12.075     High  
cufflinks 13.501     High  
cufflinks 4.94       Low
cufflinks 234.628     High High
cufflinks 26.098     High  

0 Strain