Gene : Sobic.009G182800 S. bicolor v3.1.1
Defline:  (1 of 3) PTHR23334//PTHR23334:SF25 - CCAAT/ENHANCER BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1890
Name:  ? Sobic.009G182800 Secondary Identifier:  ? PAC:37921472
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G182800 0.5kb upstream 0.5kb upstream 4227 true Chr09: 53632420-53636646 Sorghum bicolor
Sobic.009G182800 0.5kb upstream 0.5kb upstream 500 false Chr09: 53636147-53636646 Sorghum bicolor
Sobic.009G182800 0.5kb downstream 0.5kb downstream 4227 true Chr09: 53631920-53636146 Sorghum bicolor
Sobic.009G182800 0.5kb downstream 0.5kb downstream 500 false Chr09: 53631920-53632419 Sorghum bicolor
Sobic.009G182800 1.0kb upstream 1.0kb upstream 4727 true Chr09: 53632420-53637146 Sorghum bicolor
Sobic.009G182800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 53636147-53637146 Sorghum bicolor
Sobic.009G182800 1.0kb downstream 1.0kb downstream 4727 true Chr09: 53631420-53636146 Sorghum bicolor
Sobic.009G182800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 53631420-53632419 Sorghum bicolor
Sobic.009G182800 2.0kb upstream 2.0kb upstream 5727 true Chr09: 53632420-53638146 Sorghum bicolor
Sobic.009G182800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 53636147-53638146 Sorghum bicolor
Sobic.009G182800 2.0kb downstream 2.0kb downstream 5727 true Chr09: 53630420-53636146 Sorghum bicolor
Sobic.009G182800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 53630420-53632419 Sorghum bicolor
Sobic.009G182800 5.0kb upstream 5.0kb upstream 8727 true Chr09: 53632420-53641146 Sorghum bicolor
Sobic.009G182800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 53636147-53641146 Sorghum bicolor
Sobic.009G182800 5.0kb downstream 5.0kb downstream 8727 true Chr09: 53627420-53636146 Sorghum bicolor
Sobic.009G182800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 53627420-53632419 Sorghum bicolor
Sobic.009G182800 10.0kb upstream 10.0kb upstream 13727 true Chr09: 53632420-53646146 Sorghum bicolor
Sobic.009G182800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 53636147-53646146 Sorghum bicolor
Sobic.009G182800 10.0kb downstream 10.0kb downstream 13727 true Chr09: 53622420-53636146 Sorghum bicolor
Sobic.009G182800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 53622420-53632419 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176775 5267 Panicoideae View MSA
124577744 5269 Grass View MSA
122050154 5273 Angiosperm View MSA
121349674 5274 Embryophyte View MSA
123381395 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.347        
cufflinks 0.476        
cufflinks 0.889        
cufflinks 1.032        
cufflinks 0.426        
cufflinks 0.721        
cufflinks 0.43        
cufflinks 0.245       Low
cufflinks 2.222       High
cufflinks 2.145       High
cufflinks 0.966        
cufflinks 3.357       High
cufflinks 0.902        
cufflinks 1.963       High
cufflinks 0.609        
cufflinks 1.038        
cufflinks 0.559        
cufflinks 0.415        
cufflinks 0.513        
cufflinks 2.905       High
cufflinks 0.224       Low
cufflinks 0.409        
cufflinks 1.514       High
cufflinks 1.584       High
cufflinks 0.686        
cufflinks 0.45        
cufflinks 0.577        
cufflinks 0.549        
cufflinks 0.035     Low Low
cufflinks 0.909        

0 Strain