Gene : Sobic.004G348900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR36749:SF1 - F7O18.3 PROTEIN Genomic Order:  3662
Name:  ? Sobic.004G348900 Secondary Identifier:  ? PAC:37931958
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G348900 0.5kb upstream 0.5kb upstream 4200 true Chr04: 67776025-67780224 Sorghum bicolor
Sobic.004G348900 0.5kb upstream 0.5kb upstream 500 false Chr04: 67779725-67780224 Sorghum bicolor
Sobic.004G348900 0.5kb downstream 0.5kb downstream 4200 true Chr04: 67775525-67779724 Sorghum bicolor
Sobic.004G348900 0.5kb downstream 0.5kb downstream 500 false Chr04: 67775525-67776024 Sorghum bicolor
Sobic.004G348900 1.0kb upstream 1.0kb upstream 4700 true Chr04: 67776025-67780724 Sorghum bicolor
Sobic.004G348900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 67779725-67780724 Sorghum bicolor
Sobic.004G348900 1.0kb downstream 1.0kb downstream 4700 true Chr04: 67775025-67779724 Sorghum bicolor
Sobic.004G348900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 67775025-67776024 Sorghum bicolor
Sobic.004G348900 2.0kb upstream 2.0kb upstream 5700 true Chr04: 67776025-67781724 Sorghum bicolor
Sobic.004G348900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 67779725-67781724 Sorghum bicolor
Sobic.004G348900 2.0kb downstream 2.0kb downstream 5700 true Chr04: 67774025-67779724 Sorghum bicolor
Sobic.004G348900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 67774025-67776024 Sorghum bicolor
Sobic.004G348900 5.0kb upstream 5.0kb upstream 8700 true Chr04: 67776025-67784724 Sorghum bicolor
Sobic.004G348900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 67779725-67784724 Sorghum bicolor
Sobic.004G348900 5.0kb downstream 5.0kb downstream 8700 true Chr04: 67771025-67779724 Sorghum bicolor
Sobic.004G348900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 67771025-67776024 Sorghum bicolor
Sobic.004G348900 10.0kb upstream 10.0kb upstream 13700 true Chr04: 67776025-67789724 Sorghum bicolor
Sobic.004G348900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 67779725-67789724 Sorghum bicolor
Sobic.004G348900 10.0kb downstream 10.0kb downstream 13700 true Chr04: 67766025-67779724 Sorghum bicolor
Sobic.004G348900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 67766025-67776024 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177103 5267 Panicoideae View MSA
124569892 5269 Grass View MSA
122045899 5273 Angiosperm View MSA
121344385 5274 Embryophyte View MSA
123424865 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.599        
cufflinks 3.367       Low
cufflinks 3.801       Low
cufflinks 5.209        
cufflinks 4.212        
cufflinks 6.851        
cufflinks 4.779        
cufflinks 3.639       Low
cufflinks 8.303       High
cufflinks 7.783       High
cufflinks 6.489        
cufflinks 8.571       High
cufflinks 5.956        
cufflinks 9.283       High
cufflinks 4.065        
cufflinks 3.043       Low
cufflinks 4.662        
cufflinks 4.12        
cufflinks 2.704       Low
cufflinks 5.026        
cufflinks 7.721       High
cufflinks 8.639       High
cufflinks 7.446        
cufflinks 7.34        
cufflinks 4.161        
cufflinks 2.978       Low
cufflinks 5.685        
cufflinks 6.286        
cufflinks 4.909        
cufflinks 5.546        

0 Strain