Gene : Sobic.004G334601 S. bicolor v3.1.1
Defline:  (1 of 3) PTHR27009:SF21 - PR5-LIKE RECEPTOR KINASE-RELATED Genomic Order:  3511
Name:  ? Sobic.004G334601 Secondary Identifier:  ? PAC:37931642
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-7409 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G334601 0.5kb upstream 0.5kb upstream 5366 true Chr04: 66685829-66691194 Sorghum bicolor
Sobic.004G334601 0.5kb upstream 0.5kb upstream 500 false Chr04: 66690695-66691194 Sorghum bicolor
Sobic.004G334601 0.5kb downstream 0.5kb downstream 5366 true Chr04: 66685329-66690694 Sorghum bicolor
Sobic.004G334601 0.5kb downstream 0.5kb downstream 500 false Chr04: 66685329-66685828 Sorghum bicolor
Sobic.004G334601 1.0kb upstream 1.0kb upstream 5866 true Chr04: 66685829-66691694 Sorghum bicolor
Sobic.004G334601 1.0kb upstream 1.0kb upstream 1000 false Chr04: 66690695-66691694 Sorghum bicolor
Sobic.004G334601 1.0kb downstream 1.0kb downstream 5866 true Chr04: 66684829-66690694 Sorghum bicolor
Sobic.004G334601 1.0kb downstream 1.0kb downstream 1000 false Chr04: 66684829-66685828 Sorghum bicolor
Sobic.004G334601 2.0kb upstream 2.0kb upstream 6866 true Chr04: 66685829-66692694 Sorghum bicolor
Sobic.004G334601 2.0kb upstream 2.0kb upstream 2000 false Chr04: 66690695-66692694 Sorghum bicolor
Sobic.004G334601 2.0kb downstream 2.0kb downstream 6866 true Chr04: 66683829-66690694 Sorghum bicolor
Sobic.004G334601 2.0kb downstream 2.0kb downstream 2000 false Chr04: 66683829-66685828 Sorghum bicolor
Sobic.004G334601 5.0kb upstream 5.0kb upstream 9866 true Chr04: 66685829-66695694 Sorghum bicolor
Sobic.004G334601 5.0kb upstream 5.0kb upstream 5000 false Chr04: 66690695-66695694 Sorghum bicolor
Sobic.004G334601 5.0kb downstream 5.0kb downstream 9866 true Chr04: 66680829-66690694 Sorghum bicolor
Sobic.004G334601 5.0kb downstream 5.0kb downstream 5000 false Chr04: 66680829-66685828 Sorghum bicolor
Sobic.004G334601 10.0kb upstream 10.0kb upstream 14866 true Chr04: 66685829-66700694 Sorghum bicolor
Sobic.004G334601 10.0kb upstream 10.0kb upstream 10000 false Chr04: 66690695-66700694 Sorghum bicolor
Sobic.004G334601 10.0kb downstream 10.0kb downstream 14866 true Chr04: 66675829-66690694 Sorghum bicolor
Sobic.004G334601 10.0kb downstream 10.0kb downstream 10000 false Chr04: 66675829-66685828 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030354 5273 Angiosperm View MSA
122144237 5267 Panicoideae Singleton cluster - no MSA
124437030 5269 Grass Singleton cluster - no MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.025     Low  
cufflinks 0.037     Low  
cufflinks 0.07       High
cufflinks 0.059     Low  
cufflinks 0.044     Low  
cufflinks 0.096     Low High
cufflinks 0.049     Low  
cufflinks 0.016     Low Low
cufflinks 0.062     Low High
cufflinks 0.062     Low High
cufflinks 0.018     Low Low
cufflinks 0.029     Low  
cufflinks 0.049     Low  
cufflinks 0.023     Low Low
cufflinks 0.098       High
cufflinks 0.046     Low  
cufflinks 0.045     Low  
cufflinks 0.058     Low  
cufflinks 0.033     Low  
cufflinks 0.052     Low  
cufflinks 0.08     Low High
cufflinks 0.032     Low  
cufflinks 0.029     Low  
cufflinks 0.03     Low  
cufflinks 0.033     Low  
cufflinks 0.025     Low  
cufflinks 0.018     Low Low
cufflinks 0.048     Low  
cufflinks 0.031     Low  
cufflinks 0.078     Low High

0 Strain