Gene : Sobic.010G018000 S. bicolor v3.1.1
Defline:  (1 of 1) K17428 - large subunit ribosomal protein L47 (MRPL47, NCM1) Genomic Order:  179
Name:  ? Sobic.010G018000 Secondary Identifier:  ? PAC:37910831
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G018000 0.5kb upstream 0.5kb upstream 4632   true Chr10: 1489801-1494432 Sorghum bicolor
Sobic.010G018000 0.5kb upstream 0.5kb upstream 500   false Chr10: 1489801-1490300 Sorghum bicolor
Sobic.010G018000 0.5kb downstream 0.5kb downstream 4632   true Chr10: 1490301-1494932 Sorghum bicolor
Sobic.010G018000 0.5kb downstream 0.5kb downstream 500   false Chr10: 1494433-1494932 Sorghum bicolor
Sobic.010G018000 1.0kb upstream 1.0kb upstream 5132   true Chr10: 1489301-1494432 Sorghum bicolor
Sobic.010G018000 1.0kb upstream 1.0kb upstream 1000   false Chr10: 1489301-1490300 Sorghum bicolor
Sobic.010G018000 1.0kb downstream 1.0kb downstream 5132   true Chr10: 1490301-1495432 Sorghum bicolor
Sobic.010G018000 1.0kb downstream 1.0kb downstream 1000   false Chr10: 1494433-1495432 Sorghum bicolor
Sobic.010G018000 2.0kb upstream 2.0kb upstream 6132   true Chr10: 1488301-1494432 Sorghum bicolor
Sobic.010G018000 2.0kb upstream 2.0kb upstream 2000   false Chr10: 1488301-1490300 Sorghum bicolor
Sobic.010G018000 2.0kb downstream 2.0kb downstream 6132   true Chr10: 1490301-1496432 Sorghum bicolor
Sobic.010G018000 2.0kb downstream 2.0kb downstream 2000   false Chr10: 1494433-1496432 Sorghum bicolor
Sobic.010G018000 5.0kb upstream 5.0kb upstream 9132   true Chr10: 1485301-1494432 Sorghum bicolor
Sobic.010G018000 5.0kb upstream 5.0kb upstream 5000   false Chr10: 1485301-1490300 Sorghum bicolor
Sobic.010G018000 5.0kb downstream 5.0kb downstream 9132   true Chr10: 1490301-1499432 Sorghum bicolor
Sobic.010G018000 5.0kb downstream 5.0kb downstream 5000   false Chr10: 1494433-1499432 Sorghum bicolor
Sobic.010G018000 10.0kb upstream 10.0kb upstream 14132   true Chr10: 1480301-1494432 Sorghum bicolor
Sobic.010G018000 10.0kb upstream 10.0kb upstream 10000   false Chr10: 1480301-1490300 Sorghum bicolor
Sobic.010G018000 10.0kb downstream 10.0kb downstream 14132   true Chr10: 1490301-1504432 Sorghum bicolor
Sobic.010G018000 10.0kb downstream 10.0kb downstream 10000   false Chr10: 1494433-1504432 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189252 5267 Panicoideae View MSA
124572551 5269 Grass View MSA
122044209 5273 Angiosperm View MSA
121343803 5274 Embryophyte View MSA
123425806 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.439       High
cufflinks 0.301       Low
cufflinks 1.304        
cufflinks 3.025        
cufflinks 2.938        
cufflinks 2.947        
cufflinks 1.28        
cufflinks 0.425       Low
cufflinks 2.936        
cufflinks 3.164        
cufflinks 2.641        
cufflinks 1.825        
cufflinks 1.675        
cufflinks 1.76        
cufflinks 2.208        
cufflinks 1.062        
cufflinks 1.472        
cufflinks 1.512        
cufflinks 0.888       Low
cufflinks 1.333        
cufflinks 3.545        
cufflinks 3.712        
cufflinks 2.292        
cufflinks 2.55        
cufflinks 0.436       Low
cufflinks 0.181       Low
cufflinks 2.43        
cufflinks 9.559       High
cufflinks 1.594        
cufflinks 3.179        

0 Strain