Gene : Sobic.010G020400 S. bicolor v3.1.1
Defline:  (1 of 2) K03456 - serine/threonine-protein phosphatase 2A regulatory subunit A (PPP2R1) Genomic Order:  203
Name:  ? Sobic.010G020400 Secondary Identifier:  ? PAC:37912075
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G020400 0.5kb upstream 0.5kb upstream 8129   true Chr10: 1644769-1652897 Sorghum bicolor
Sobic.010G020400 0.5kb upstream 0.5kb upstream 500   false Chr10: 1644769-1645268 Sorghum bicolor
Sobic.010G020400 0.5kb downstream 0.5kb downstream 8129   true Chr10: 1645269-1653397 Sorghum bicolor
Sobic.010G020400 0.5kb downstream 0.5kb downstream 500   false Chr10: 1652898-1653397 Sorghum bicolor
Sobic.010G020400 1.0kb upstream 1.0kb upstream 8629   true Chr10: 1644269-1652897 Sorghum bicolor
Sobic.010G020400 1.0kb upstream 1.0kb upstream 1000   false Chr10: 1644269-1645268 Sorghum bicolor
Sobic.010G020400 1.0kb downstream 1.0kb downstream 8629   true Chr10: 1645269-1653897 Sorghum bicolor
Sobic.010G020400 1.0kb downstream 1.0kb downstream 1000   false Chr10: 1652898-1653897 Sorghum bicolor
Sobic.010G020400 2.0kb upstream 2.0kb upstream 9629   true Chr10: 1643269-1652897 Sorghum bicolor
Sobic.010G020400 2.0kb upstream 2.0kb upstream 2000   false Chr10: 1643269-1645268 Sorghum bicolor
Sobic.010G020400 2.0kb downstream 2.0kb downstream 9629   true Chr10: 1645269-1654897 Sorghum bicolor
Sobic.010G020400 2.0kb downstream 2.0kb downstream 2000   false Chr10: 1652898-1654897 Sorghum bicolor
Sobic.010G020400 5.0kb upstream 5.0kb upstream 12629   true Chr10: 1640269-1652897 Sorghum bicolor
Sobic.010G020400 5.0kb upstream 5.0kb upstream 5000   false Chr10: 1640269-1645268 Sorghum bicolor
Sobic.010G020400 5.0kb downstream 5.0kb downstream 12629   true Chr10: 1645269-1657897 Sorghum bicolor
Sobic.010G020400 5.0kb downstream 5.0kb downstream 5000   false Chr10: 1652898-1657897 Sorghum bicolor
Sobic.010G020400 10.0kb upstream 10.0kb upstream 17629   true Chr10: 1635269-1652897 Sorghum bicolor
Sobic.010G020400 10.0kb upstream 10.0kb upstream 10000   false Chr10: 1635269-1645268 Sorghum bicolor
Sobic.010G020400 10.0kb downstream 10.0kb downstream 17629   true Chr10: 1645269-1662897 Sorghum bicolor
Sobic.010G020400 10.0kb downstream 10.0kb downstream 10000   false Chr10: 1652898-1662897 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182186 5267 Panicoideae View MSA
124569380 5269 Grass View MSA
122049512 5273 Angiosperm View MSA
121346959 5274 Embryophyte View MSA
123427747 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.789     High  
cufflinks 15.126     High Low
cufflinks 37.206     High  
cufflinks 40.601     High  
cufflinks 46.444     High  
cufflinks 22.39     High Low
cufflinks 46.092     High  
cufflinks 20.279     High Low
cufflinks 46.86     High  
cufflinks 47.772     High  
cufflinks 51.562     High  
cufflinks 56.764     High  
cufflinks 50.05     High  
cufflinks 54.765     High  
cufflinks 47.555     High  
cufflinks 28.777     High  
cufflinks 46.943     High  
cufflinks 48.786     High  
cufflinks 22.158     High Low
cufflinks 56.021     High  
cufflinks 46.839     High  
cufflinks 68.226     High High
cufflinks 62.592     High  
cufflinks 63.217     High  
cufflinks 25.122     High  
cufflinks 14.515     High Low
cufflinks 49.16     High  
cufflinks 8.499       Low
cufflinks 39.267     High  
cufflinks 47.807     High  

0 Strain