Gene : Sobic.009G237200 S. bicolor v3.1.1
Defline:  (1 of 3) K02873 - large subunit ribosomal protein L13e (RP-L13e, RPL13) Genomic Order:  2448
Name:  ? Sobic.009G237200 Secondary Identifier:  ? PAC:37920844
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G237200 0.5kb upstream 0.5kb upstream 3244 true Chr09: 57549325-57552568 Sorghum bicolor
Sobic.009G237200 0.5kb upstream 0.5kb upstream 500 false Chr09: 57549325-57549824 Sorghum bicolor
Sobic.009G237200 0.5kb downstream 0.5kb downstream 3244 true Chr09: 57549825-57553068 Sorghum bicolor
Sobic.009G237200 0.5kb downstream 0.5kb downstream 500 false Chr09: 57552569-57553068 Sorghum bicolor
Sobic.009G237200 1.0kb upstream 1.0kb upstream 3744 true Chr09: 57548825-57552568 Sorghum bicolor
Sobic.009G237200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 57548825-57549824 Sorghum bicolor
Sobic.009G237200 1.0kb downstream 1.0kb downstream 3744 true Chr09: 57549825-57553568 Sorghum bicolor
Sobic.009G237200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 57552569-57553568 Sorghum bicolor
Sobic.009G237200 2.0kb upstream 2.0kb upstream 4744 true Chr09: 57547825-57552568 Sorghum bicolor
Sobic.009G237200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 57547825-57549824 Sorghum bicolor
Sobic.009G237200 2.0kb downstream 2.0kb downstream 4744 true Chr09: 57549825-57554568 Sorghum bicolor
Sobic.009G237200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 57552569-57554568 Sorghum bicolor
Sobic.009G237200 5.0kb upstream 5.0kb upstream 7744 true Chr09: 57544825-57552568 Sorghum bicolor
Sobic.009G237200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 57544825-57549824 Sorghum bicolor
Sobic.009G237200 5.0kb downstream 5.0kb downstream 7744 true Chr09: 57549825-57557568 Sorghum bicolor
Sobic.009G237200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 57552569-57557568 Sorghum bicolor
Sobic.009G237200 10.0kb upstream 10.0kb upstream 12744 true Chr09: 57539825-57552568 Sorghum bicolor
Sobic.009G237200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 57539825-57549824 Sorghum bicolor
Sobic.009G237200 10.0kb downstream 10.0kb downstream 12744 true Chr09: 57549825-57562568 Sorghum bicolor
Sobic.009G237200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 57552569-57562568 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195726 5267 Panicoideae View MSA
124570467 5269 Grass View MSA
122049765 5273 Angiosperm View MSA
121344371 5274 Embryophyte View MSA
123426358 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.45     High High
cufflinks 1.693       Low
cufflinks 5.353        
cufflinks 11.146        
cufflinks 13.202     High  
cufflinks 8.864        
cufflinks 9.097        
cufflinks 2.177       Low
cufflinks 11.258        
cufflinks 11.499        
cufflinks 12.092     High  
cufflinks 9.1        
cufflinks 8.836        
cufflinks 11.268        
cufflinks 11.219        
cufflinks 5.011        
cufflinks 11.528     High  
cufflinks 12.304     High  
cufflinks 3.968       Low
cufflinks 10.966        
cufflinks 26.905     High High
cufflinks 17.459     High  
cufflinks 15.364     High  
cufflinks 16.518     High  
cufflinks 2.597       Low
cufflinks 1.223       Low
cufflinks 8.015        
cufflinks 18.417     High  
cufflinks 10.853        
cufflinks 17.351     High  

0 Strain