Gene : Sobic.009G258400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12225 - ADHESION REGULATING MOLECULE 1 110 KDA CELL MEMBRANE GLYCOPROTEIN Genomic Order:  2663
Name:  ? Sobic.009G258400 Secondary Identifier:  ? PAC:37919556
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G258400 0.5kb upstream 0.5kb upstream 5288 true Chr09: 59220416-59225703 Sorghum bicolor
Sobic.009G258400 0.5kb upstream 0.5kb upstream 500 false Chr09: 59225204-59225703 Sorghum bicolor
Sobic.009G258400 0.5kb downstream 0.5kb downstream 5288 true Chr09: 59219916-59225203 Sorghum bicolor
Sobic.009G258400 0.5kb downstream 0.5kb downstream 500 false Chr09: 59219916-59220415 Sorghum bicolor
Sobic.009G258400 1.0kb upstream 1.0kb upstream 5788 true Chr09: 59220416-59226203 Sorghum bicolor
Sobic.009G258400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 59225204-59226203 Sorghum bicolor
Sobic.009G258400 1.0kb downstream 1.0kb downstream 5788 true Chr09: 59219416-59225203 Sorghum bicolor
Sobic.009G258400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 59219416-59220415 Sorghum bicolor
Sobic.009G258400 2.0kb upstream 2.0kb upstream 6788 true Chr09: 59220416-59227203 Sorghum bicolor
Sobic.009G258400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 59225204-59227203 Sorghum bicolor
Sobic.009G258400 2.0kb downstream 2.0kb downstream 6788 true Chr09: 59218416-59225203 Sorghum bicolor
Sobic.009G258400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 59218416-59220415 Sorghum bicolor
Sobic.009G258400 5.0kb upstream 5.0kb upstream 9788 true Chr09: 59220416-59230203 Sorghum bicolor
Sobic.009G258400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 59225204-59230203 Sorghum bicolor
Sobic.009G258400 5.0kb downstream 5.0kb downstream 9788 true Chr09: 59215416-59225203 Sorghum bicolor
Sobic.009G258400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 59215416-59220415 Sorghum bicolor
Sobic.009G258400 10.0kb upstream 10.0kb upstream 14788 true Chr09: 59220416-59235203 Sorghum bicolor
Sobic.009G258400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 59225204-59235203 Sorghum bicolor
Sobic.009G258400 10.0kb downstream 10.0kb downstream 14788 true Chr09: 59210416-59225203 Sorghum bicolor
Sobic.009G258400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 59210416-59220415 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041235 5273 Angiosperm View MSA
122183961 5267 Panicoideae View MSA
124580756 5269 Grass View MSA
121344087 5274 Embryophyte View MSA
123425149 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.435     High High
cufflinks 3.203       Low
cufflinks 8.037        
cufflinks 13.973     High  
cufflinks 11.244        
cufflinks 10.68        
cufflinks 9.233        
cufflinks 3.998       Low
cufflinks 16.531     High High
cufflinks 15.581     High  
cufflinks 10.694        
cufflinks 10.865        
cufflinks 11.606     High  
cufflinks 10.976        
cufflinks 10.674        
cufflinks 7.203        
cufflinks 9.791        
cufflinks 10.284        
cufflinks 5.651       Low
cufflinks 12.312     High  
cufflinks 16.889     High High
cufflinks 13.973     High  
cufflinks 12.596     High  
cufflinks 12.746     High  
cufflinks 5.968       Low
cufflinks 2.911       Low
cufflinks 12.128     High  
cufflinks 22.529     High High
cufflinks 7.391        
cufflinks 13.234     High  

0 Strain