Gene : Sobic.009G258600 S. bicolor v3.1.1
Defline:  (1 of 1) K12627 - U6 snRNA-associated Sm-like protein LSm8 (LSM8) Genomic Order:  2665
Name:  ? Sobic.009G258600 Secondary Identifier:  ? PAC:37920417
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G258600 0.5kb upstream 0.5kb upstream 2866 true Chr09: 59231319-59234184 Sorghum bicolor
Sobic.009G258600 0.5kb upstream 0.5kb upstream 500 false Chr09: 59231319-59231818 Sorghum bicolor
Sobic.009G258600 0.5kb downstream 0.5kb downstream 2866 true Chr09: 59231819-59234684 Sorghum bicolor
Sobic.009G258600 0.5kb downstream 0.5kb downstream 500 false Chr09: 59234185-59234684 Sorghum bicolor
Sobic.009G258600 1.0kb upstream 1.0kb upstream 3366 true Chr09: 59230819-59234184 Sorghum bicolor
Sobic.009G258600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 59230819-59231818 Sorghum bicolor
Sobic.009G258600 1.0kb downstream 1.0kb downstream 3366 true Chr09: 59231819-59235184 Sorghum bicolor
Sobic.009G258600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 59234185-59235184 Sorghum bicolor
Sobic.009G258600 2.0kb upstream 2.0kb upstream 4366 true Chr09: 59229819-59234184 Sorghum bicolor
Sobic.009G258600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 59229819-59231818 Sorghum bicolor
Sobic.009G258600 2.0kb downstream 2.0kb downstream 4366 true Chr09: 59231819-59236184 Sorghum bicolor
Sobic.009G258600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 59234185-59236184 Sorghum bicolor
Sobic.009G258600 5.0kb upstream 5.0kb upstream 7366 true Chr09: 59226819-59234184 Sorghum bicolor
Sobic.009G258600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 59226819-59231818 Sorghum bicolor
Sobic.009G258600 5.0kb downstream 5.0kb downstream 7366 true Chr09: 59231819-59239184 Sorghum bicolor
Sobic.009G258600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 59234185-59239184 Sorghum bicolor
Sobic.009G258600 10.0kb upstream 10.0kb upstream 12366 true Chr09: 59221819-59234184 Sorghum bicolor
Sobic.009G258600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 59221819-59231818 Sorghum bicolor
Sobic.009G258600 10.0kb downstream 10.0kb downstream 12366 true Chr09: 59231819-59244184 Sorghum bicolor
Sobic.009G258600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 59234185-59244184 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195199 5267 Panicoideae View MSA
124580941 5269 Grass View MSA
122047376 5273 Angiosperm View MSA
121345088 5274 Embryophyte View MSA
123423767 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.257       High
cufflinks 0.7       Low
cufflinks 2.615        
cufflinks 4.859        
cufflinks 4.86        
cufflinks 6.949       High
cufflinks 3.645        
cufflinks 1.066       Low
cufflinks 4.663        
cufflinks 4.882        
cufflinks 2.891        
cufflinks 2.519        
cufflinks 4.142        
cufflinks 3.66        
cufflinks 4.782        
cufflinks 3.14        
cufflinks 4.076        
cufflinks 4.468        
cufflinks 1.986        
cufflinks 4.197        
cufflinks 7.536       High
cufflinks 4.68        
cufflinks 3.958        
cufflinks 4.006        
cufflinks 0.918       Low
cufflinks 0.437       Low
cufflinks 2.755        
cufflinks 7.79       High
cufflinks 3.223        
cufflinks 6.404        

0 Strain